Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra028749.1-P | Field mustard | nucleus | 87.96 | 96.55 |
| CDY14103 | Canola | nucleus | 96.34 | 96.34 |
| CDX98862 | Canola | nucleus | 85.34 | 84.9 |
| CDX70130 | Canola | nucleus | 84.82 | 84.38 |
| AT5G05770.1 | Thale cress | nucleus | 51.31 | 80.33 |
| CDY01007 | Canola | nucleus | 69.11 | 69.11 |
| CDY08539 | Canola | nucleus | 68.59 | 68.59 |
| Solyc03g096300.2.1 | Tomato | nucleus | 49.21 | 59.49 |
| PGSC0003DMT400053435 | Potato | nucleus | 48.69 | 59.24 |
| KRH73152 | Soybean | nucleus | 51.31 | 55.37 |
| VIT_13s0019g03460.t01 | Wine grape | nucleus | 40.31 | 54.61 |
| KRG97769 | Soybean | nucleus | 48.69 | 53.45 |
| KRH31116 | Soybean | nucleus | 49.21 | 52.22 |
| GSMUA_Achr7P14860_001 | Banana | nucleus | 43.46 | 43.68 |
| Os01t0854500-01 | Rice | nucleus | 45.03 | 43.0 |
| OQU87881 | Sorghum | nucleus | 46.07 | 40.37 |
| TraesCS3B01G399800.1 | Wheat | nucleus | 43.46 | 39.71 |
| HORVU3Hr1G085050.3 | Barley | nucleus | 43.46 | 39.52 |
| TraesCS3D01G361100.1 | Wheat | nucleus | 43.46 | 39.52 |
| Zm00001d042821_P001 | Maize | nucleus | 45.55 | 39.37 |
| TraesCS3A01G368100.1 | Wheat | nucleus | 43.46 | 39.15 |
| Zm00001d012330_P001 | Maize | nucleus | 44.5 | 36.17 |
| CDY02582 | Canola | nucleus | 18.85 | 29.75 |
| CDY70975 | Canola | nucleus | 22.51 | 25.9 |
| CDY71075 | Canola | nucleus | 15.18 | 23.97 |
| CDY43848 | Canola | nucleus | 27.23 | 20.72 |
| CDY01358 | Canola | nucleus | 14.14 | 20.3 |
| CDY40847 | Canola | nucleus | 26.7 | 20.0 |
| CDY25659 | Canola | nucleus | 26.18 | 19.92 |
| CDY17046 | Canola | nucleus | 26.18 | 19.53 |
| CDX95764 | Canola | nucleus | 22.51 | 19.37 |
| CDX83299 | Canola | nucleus | 22.51 | 19.03 |
| CDX77191 | Canola | nucleus | 23.04 | 18.64 |
| CDX80277 | Canola | nucleus | 20.42 | 18.57 |
| CDY31716 | Canola | nucleus | 22.51 | 18.38 |
| CDY29212 | Canola | nucleus | 28.27 | 18.37 |
| CDY41086 | Canola | nucleus | 25.65 | 18.35 |
| CDY32648 | Canola | nucleus | 16.75 | 18.29 |
| CDY55370 | Canola | nucleus | 28.8 | 18.21 |
| CDY38144 | Canola | nucleus | 28.8 | 18.21 |
| CDY33030 | Canola | nucleus | 19.9 | 18.1 |
| CDY47803 | Canola | nucleus | 28.27 | 17.88 |
| CDY33728 | Canola | nucleus | 24.61 | 17.09 |
| CDY30337 | Canola | nucleus | 28.27 | 17.09 |
| CDY02885 | Canola | nucleus | 17.28 | 16.58 |
| CDX75955 | Canola | nucleus | 30.37 | 16.57 |
| CDX81686 | Canola | nucleus | 25.13 | 16.55 |
| CDY51928 | Canola | nucleus | 30.37 | 16.43 |
| CDX92182 | Canola | nucleus | 29.84 | 16.24 |
| CDY66658 | Canola | nucleus | 29.32 | 15.95 |
| CDY31870 | Canola | nucleus | 16.23 | 15.9 |
| CDX93197 | Canola | nucleus | 16.23 | 15.9 |
| CDY41648 | Canola | nucleus | 13.61 | 15.2 |
| CDY65899 | Canola | nucleus | 15.18 | 13.88 |
| CDY29511 | Canola | nucleus | 14.66 | 13.79 |
| CDY40623 | Canola | nucleus | 17.28 | 12.55 |
| CDX72546 | Canola | nucleus | 16.75 | 12.26 |
| CDY24814 | Canola | nucleus | 15.18 | 12.13 |
| CDX75511 | Canola | nucleus | 16.23 | 12.11 |
| CDX69148 | Canola | nucleus | 16.75 | 12.08 |
| CDX87744 | Canola | nucleus | 18.85 | 11.25 |
| CDY48780 | Canola | nucleus | 18.85 | 11.25 |
| CDY72488 | Canola | nucleus, plastid | 13.61 | 10.53 |
| CDY29211 | Canola | mitochondrion | 7.85 | 10.07 |
| CDY66087 | Canola | nucleus | 14.66 | 10.0 |
| CDY02686 | Canola | nucleus | 14.66 | 9.89 |
| CDY38461 | Canola | nucleus | 14.14 | 9.85 |
| CDY16883 | Canola | nucleus | 14.14 | 9.78 |
| CDY29949 | Canola | nucleus | 14.14 | 9.34 |
| CDY21173 | Canola | nucleus | 14.14 | 9.34 |
| CDY69228 | Canola | nucleus | 18.85 | 9.23 |
| CDY17211 | Canola | nucleus | 18.85 | 9.23 |
| CDY51756 | Canola | plastid | 15.18 | 8.9 |
| CDX79549 | Canola | nucleus | 18.32 | 8.82 |
| CDY50656 | Canola | nucleus | 14.66 | 8.26 |
Protein Annotations
| EnsemblPlants:CDY04966 | EnsemblPlantsGene:GSBRNA2T00119696001 | Gene3D:1.10.10.60 | GO:A0A078EUQ3 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0005488 | InterPro:Homeobox-like_sf | InterPro:Homeobox_dom | InterPro:IPR001356 | PANTHER:PTHR24326 |
| PANTHER:PTHR24326:SF149 | PFAM:PF00046 | PFscan:PS50071 | ProteinID:CDY04966 | ProteinID:CDY04966.1 | SEG:seg |
| SMART:SM00389 | SUPFAM:SSF46689 | UniParc:UPI0004EF0543 | MapMan:15.5.3.6 | : | : |
Description
BnaAnng01480D
Coordinates
chrLK031958:+:870586..871250
Molecular Weight (calculated)
21833.5 Da
IEP (calculated)
7.196
GRAVY (calculated)
-0.801
Length
191 amino acids
Sequence
(BLAST)
(BLAST)
001: MSLEGFSTKA RGLGNNNNMG GGGTGTKCGR WNPTVEQVKL LTDLFKAGLR TPSTDQIQKI STELSVYGKI ESKNVFYWFQ NHKARERQKR RTISTVDYDH
101: RQDTNLSLSY RHNPCHHQTP PKDTFEGREE EENVIETLQL FPLSKVERAD ITAASYDEYI REHVNTTVFS TYSSCGAEME HPPLDLRLSF L
101: RQDTNLSLSY RHNPCHHQTP PKDTFEGREE EENVIETLQL FPLSKVERAD ITAASYDEYI REHVNTTVFS TYSSCGAEME HPPLDLRLSF L
001: MSSRGFNIKA RGLCNNNNGG GGTGAKCGRW NPTVEQVKLL TDLFKAGLRT PSTDQIQKIS MELSFYGKIE SKNVFYWFQN HKARERQKCR KISTVKFDHR
101: QDTDLSKPRR DNVRRHQLPA KG
101: QDTDLSKPRR DNVRRHQLPA KG
Arabidopsis Description
WOX7WUSCHEL-related homeobox 7 [Source:UniProtKB/Swiss-Prot;Acc:Q9FFK0]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.