Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- mitochondrion 5
- plastid 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY29212 | Canola | nucleus | 89.93 | 45.58 |
| CDY30337 | Canola | nucleus | 73.83 | 34.81 |
| CDY55370 | Canola | nucleus | 69.8 | 34.44 |
| CDY38144 | Canola | nucleus | 69.8 | 34.44 |
| CDY47803 | Canola | nucleus | 67.11 | 33.11 |
| VIT_04s0023g03310.t01 | Wine grape | nucleus | 29.53 | 15.71 |
| KRH28790 | Soybean | nucleus | 29.53 | 15.22 |
| KRH76665 | Soybean | nucleus | 28.86 | 14.53 |
| Solyc02g083950.2.1 | Tomato | nucleus | 25.5 | 13.97 |
| PGSC0003DMT400009157 | Potato | nucleus | 24.83 | 12.89 |
| CDX70130 | Canola | nucleus | 10.74 | 8.33 |
| CDX98862 | Canola | nucleus | 10.74 | 8.33 |
| CDY02582 | Canola | nucleus | 6.71 | 8.26 |
| CDY14103 | Canola | nucleus | 10.07 | 7.85 |
| CDY08539 | Canola | nucleus | 10.07 | 7.85 |
| CDY04966 | Canola | nucleus | 10.07 | 7.85 |
| CDY01007 | Canola | nucleus | 9.4 | 7.33 |
| CDY32648 | Canola | nucleus | 7.38 | 6.29 |
| CDY02885 | Canola | nucleus | 8.05 | 6.03 |
| CDX80277 | Canola | nucleus | 8.05 | 5.71 |
| CDY33030 | Canola | nucleus | 8.05 | 5.71 |
| CDY21173 | Canola | nucleus | 10.74 | 5.54 |
| CDY29949 | Canola | nucleus | 10.74 | 5.54 |
| CDY72488 | Canola | nucleus, plastid | 8.72 | 5.26 |
| CDY43848 | Canola | nucleus | 8.05 | 4.78 |
| CDY25659 | Canola | nucleus | 8.05 | 4.78 |
| CDY16883 | Canola | nucleus | 8.72 | 4.71 |
| CDY51756 | Canola | plastid | 10.07 | 4.6 |
| CDX81686 | Canola | nucleus | 8.72 | 4.48 |
| CDY38461 | Canola | nucleus | 8.05 | 4.38 |
| CDY33728 | Canola | nucleus | 8.05 | 4.36 |
| CDY40847 | Canola | nucleus | 7.38 | 4.31 |
| CDY66087 | Canola | nucleus | 8.05 | 4.29 |
| CDY02686 | Canola | nucleus | 8.05 | 4.24 |
| GSMUA_Achr7P07430_001 | Banana | nucleus | 4.03 | 4.2 |
| CDY50656 | Canola | nucleus | 9.4 | 4.13 |
| CDX87744 | Canola | nucleus | 8.72 | 4.06 |
| CDY48780 | Canola | nucleus | 8.72 | 4.06 |
| CDY17046 | Canola | nucleus | 6.71 | 3.91 |
| CDY31716 | Canola | nucleus | 6.04 | 3.85 |
| CDX77191 | Canola | nucleus | 6.04 | 3.81 |
| CDX79549 | Canola | nucleus | 10.07 | 3.78 |
| CDX75955 | Canola | nucleus | 8.72 | 3.71 |
| CDX92182 | Canola | nucleus | 8.72 | 3.7 |
| CDY66658 | Canola | nucleus | 8.72 | 3.7 |
| CDY51928 | Canola | nucleus | 8.72 | 3.68 |
| CDX95764 | Canola | nucleus | 5.37 | 3.6 |
| CDX83299 | Canola | nucleus | 4.7 | 3.1 |
| CDY17211 | Canola | nucleus | 8.05 | 3.08 |
| CDY69228 | Canola | nucleus | 8.05 | 3.08 |
| CDY41086 | Canola | nucleus | 5.37 | 3.0 |
| CDX75511 | Canola | nucleus | 4.03 | 2.34 |
| CDX72546 | Canola | nucleus | 4.03 | 2.3 |
| CDY29511 | Canola | nucleus | 2.68 | 1.97 |
| CDY65899 | Canola | nucleus | 2.68 | 1.91 |
| CDY40623 | Canola | nucleus | 3.36 | 1.9 |
| CDX69148 | Canola | nucleus | 3.36 | 1.89 |
| CDY70975 | Canola | nucleus | 2.01 | 1.81 |
| CDY24814 | Canola | nucleus | 2.68 | 1.67 |
| CDX93197 | Canola | nucleus | 2.01 | 1.54 |
| CDY31870 | Canola | nucleus | 2.01 | 1.54 |
| CDY01358 | Canola | nucleus | 1.34 | 1.5 |
| CDY41648 | Canola | nucleus | 1.34 | 1.17 |
| CDY71075 | Canola | nucleus | 0.67 | 0.83 |
Protein Annotations
| EnsemblPlants:CDY29211 | EnsemblPlantsGene:GSBRNA2T00042122001 | PANTHER:PTHR24326 | PANTHER:PTHR24326:SF510 | ProteinID:CDY29211 | ProteinID:CDY29211.1 |
| UniParc:UPI0004EEFAF4 | UniProt:A0A078GUJ2 | MapMan:35.1 | : | : | : |
Description
BnaA06g25460DBnaA06g25460D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GUJ2]
Coordinates
chrLK032233:-:248092..252044
Molecular Weight (calculated)
16725.3 Da
IEP (calculated)
6.332
GRAVY (calculated)
-0.632
Length
149 amino acids
Sequence
(BLAST)
(BLAST)
001: MSVFFSLFFY NVRRNTNHAS SGTEYGVFSA SNGYISSHIY EPMEQDCSMS YNNVGGGWTN IDHNHHYSTP AYNFFDRPML LSGLEGHHQE EKEYGGDAYL
101: EHRRTLPLFP LHGEDHINGG GGSILKYGQS DGCDRYGRGP CASLKLCLN
101: EHRRTLPLFP LHGEDHINGG GGSILKYGQS DGCDRYGRGP CASLKLCLN
001: MEPPQHQHHH HQADQESGNN NNNKSGSGGY TCRQTSTRWT PTTEQIKILK ELYYNNAIRS PTADQIQKIT ARLRQFGKIE GKNVFYWFQN HKARERQKKR
101: FNGTNMTTPS SSPNSVMMAA NDHYHPLLHH HHGVPMQRPA NSVNVKLNQD HHLYHHNKPY PSFNNGNLNH ASSGTECGVV NASNGYMSSH VYGSMEQDCS
201: MNYNNVGGGW ANMDHHYSSA PYNFFDRAKP LFGLEGHQEE EECGGDAYLE HRRTLPLFPM HGEDHINGGS GAIWKYGQSE VRPCASLELR LN
101: FNGTNMTTPS SSPNSVMMAA NDHYHPLLHH HHGVPMQRPA NSVNVKLNQD HHLYHHNKPY PSFNNGNLNH ASSGTECGVV NASNGYMSSH VYGSMEQDCS
201: MNYNNVGGGW ANMDHHYSSA PYNFFDRAKP LFGLEGHQEE EECGGDAYLE HRRTLPLFPM HGEDHINGGS GAIWKYGQSE VRPCASLELR LN
Arabidopsis Description
WUSProtein WUSCHEL [Source:UniProtKB/Swiss-Prot;Acc:Q9SB92]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.