Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- plastid 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra001694.1-P | Field mustard | nucleus | 97.14 | 96.32 |
| CDY51928 | Canola | nucleus | 97.14 | 96.32 |
| CDY66658 | Canola | nucleus | 84.29 | 84.05 |
| CDY71075 | Canola | nucleus | 28.86 | 83.47 |
| CDX92182 | Canola | nucleus | 81.71 | 81.48 |
| AT3G18010.1 | Thale cress | nucleus | 78.57 | 78.57 |
| KRH60534 | Soybean | nucleus | 45.14 | 44.01 |
| KRH41831 | Soybean | nucleus | 29.43 | 43.28 |
| VIT_17s0000g02460.t01 | Wine grape | nucleus | 40.29 | 40.99 |
| CDY70975 | Canola | nucleus | 19.14 | 40.36 |
| KRH48612 | Soybean | nucleus | 41.14 | 40.34 |
| KRH39103 | Soybean | nucleus | 35.43 | 38.63 |
| VIT_01s0011g05020.t01 | Wine grape | nucleus | 35.43 | 38.27 |
| CDY02582 | Canola | nucleus | 12.57 | 36.36 |
| Solyc03g118770.2.1 | Tomato | nucleus | 40.29 | 35.88 |
| PGSC0003DMT400014464 | Potato | nucleus | 39.71 | 35.55 |
| CDY41086 | Canola | nucleus | 25.14 | 32.96 |
| CDY01007 | Canola | nucleus | 16.86 | 30.89 |
| CDY08539 | Canola | nucleus | 16.86 | 30.89 |
| CDX98862 | Canola | nucleus | 16.86 | 30.73 |
| CDX70130 | Canola | nucleus | 16.86 | 30.73 |
| CDY04966 | Canola | nucleus | 16.57 | 30.37 |
| CDY14103 | Canola | nucleus | 16.57 | 30.37 |
| KRG89341 | Soybean | nucleus | 26.57 | 27.6 |
| KRH50388 | Soybean | nucleus | 26.0 | 27.33 |
| CDY40847 | Canola | nucleus | 19.71 | 27.06 |
| CDY43848 | Canola | nucleus | 19.14 | 26.69 |
| CDY33728 | Canola | nucleus | 20.57 | 26.18 |
| CDY17046 | Canola | nucleus | 19.14 | 26.17 |
| CDY25659 | Canola | nucleus | 18.57 | 25.9 |
| CDX81686 | Canola | nucleus | 21.43 | 25.86 |
| CDX95764 | Canola | nucleus | 15.71 | 24.77 |
| CDX83299 | Canola | nucleus | 15.71 | 24.34 |
| CDY31716 | Canola | nucleus | 15.71 | 23.5 |
| CDX77191 | Canola | nucleus | 15.71 | 23.31 |
| CDX80277 | Canola | nucleus | 13.14 | 21.9 |
| CDY32648 | Canola | nucleus | 10.86 | 21.71 |
| CDY33030 | Canola | nucleus | 12.86 | 21.43 |
| CDY29212 | Canola | nucleus | 17.14 | 20.41 |
| CDY38144 | Canola | nucleus | 17.14 | 19.87 |
| CDY01358 | Canola | nucleus | 7.43 | 19.55 |
| CDY55370 | Canola | nucleus | 16.86 | 19.54 |
| CDY02885 | Canola | nucleus | 10.86 | 19.1 |
| CDY30337 | Canola | nucleus | 17.14 | 18.99 |
| CDY47803 | Canola | nucleus | 16.29 | 18.87 |
| CDY41648 | Canola | nucleus | 8.86 | 18.13 |
| CDX93197 | Canola | nucleus | 9.43 | 16.92 |
| CDY31870 | Canola | nucleus | 9.43 | 16.92 |
| CDY29511 | Canola | nucleus | 9.71 | 16.75 |
| CDY65899 | Canola | nucleus | 9.43 | 15.79 |
| CDX75511 | Canola | nucleus | 10.86 | 14.84 |
| CDX69148 | Canola | nucleus | 10.57 | 13.96 |
| CDY24814 | Canola | nucleus | 9.43 | 13.81 |
| CDX72546 | Canola | nucleus | 10.29 | 13.79 |
| CDY72488 | Canola | nucleus, plastid | 9.71 | 13.77 |
| CDY40623 | Canola | nucleus | 10.29 | 13.69 |
| CDY16883 | Canola | nucleus | 10.29 | 13.04 |
| CDY69228 | Canola | nucleus | 14.29 | 12.82 |
| CDY17211 | Canola | nucleus | 14.29 | 12.82 |
| CDY38461 | Canola | nucleus | 10.0 | 12.77 |
| CDX79549 | Canola | nucleus | 14.29 | 12.59 |
| CDX87744 | Canola | nucleus | 11.43 | 12.5 |
| CDY48780 | Canola | nucleus | 11.43 | 12.5 |
| CDY29949 | Canola | nucleus | 10.29 | 12.46 |
| CDY21173 | Canola | nucleus | 10.29 | 12.46 |
| CDY02686 | Canola | nucleus | 10.0 | 12.37 |
| CDY51756 | Canola | plastid | 11.43 | 12.27 |
| CDY66087 | Canola | nucleus | 9.71 | 12.14 |
| CDY50656 | Canola | nucleus | 10.86 | 11.21 |
| CDY29211 | Canola | mitochondrion | 3.71 | 8.72 |
Protein Annotations
| EnsemblPlants:CDX75955 | EnsemblPlantsGene:GSBRNA2T00123985001 | Gene3D:1.10.10.60 | GO:A0A078CGG9 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0005488 | InterPro:Homeobox-like_sf | InterPro:Homeobox_dom | InterPro:IPR001356 | PANTHER:PTHR24326 |
| PANTHER:PTHR24326:SF224 | PFAM:PF00046 | PFscan:PS50071 | ProteinID:CDX75955 | ProteinID:CDX75955.1 | SEG:seg |
| SMART:SM00389 | SUPFAM:SSF46689 | UniParc:UPI0004EE8788 | MapMan:15.5.3.6 | : | : |
Description
BnaC03g40380D
Coordinates
chrLK031805:-:2139238..2141287
Molecular Weight (calculated)
40026.8 Da
IEP (calculated)
7.910
GRAVY (calculated)
-1.006
Length
350 amino acids
Sequence
(BLAST)
(BLAST)
001: MWMMGYNEGG ADSFNGGRKL RPLIPRLSSC PTATANTYSD HRFNMAVVTT MTAEQNKREL MMLNSEPQHP PAMVSSRWNP TPDQLKALEE LYQQGTRTPS
101: ADHIQQITAQ LRRYGKIEGK NVFYWFQNHK ARERQKRRRQ MENGHDESVV TTMSLVSNQG FDKKDSKGYK VEQTKNWICS VGCDTQQEKP HDHHHQEEPV
201: SIAMVATKRN GRHGGDEIQS FPVRSARWHM MQLPPGLYPS SQQHHNHHQL NLNSTTVSLN LSTSNSNVSA PKDTVTFSPS FLRTRGARNT EACDDNKDQE
301: QHEDCSNGEL EHQEHTLELF PLRKEGFCSN GGKEKESGIQ CFYEFLPLKN
101: ADHIQQITAQ LRRYGKIEGK NVFYWFQNHK ARERQKRRRQ MENGHDESVV TTMSLVSNQG FDKKDSKGYK VEQTKNWICS VGCDTQQEKP HDHHHQEEPV
201: SIAMVATKRN GRHGGDEIQS FPVRSARWHM MQLPPGLYPS SQQHHNHHQL NLNSTTVSLN LSTSNSNVSA PKDTVTFSPS FLRTRGARNT EACDDNKDQE
301: QHEDCSNGEL EHQEHTLELF PLRKEGFCSN GGKEKESGIQ CFYEFLPLKN
001: MWTMGYNEGG ADSFNGGRKL RPLIPRLTSC PTAAVNTNSD HRFNMAVVTM TAEQNKRELM MLNSEPQHPP VMVSSRWNPT PDQLRVLEEL YRQGTRTPSA
101: DHIQQITAQL RRYGKIEGKN VFYWFQNHKA RERQKRRRQM ETGHEETVLS TASLVSNHGF DKKDPPGYKV EQVKNWICSV GCDTQPEKPS RDYHLEEPAN
201: IRVEHNARCG GDERRSFLGI NTTWQMMQLP PSFYSSSHHH HQRNLILNSP TVSSNMSNSN NAVSASKDTV TVSPVFLRTR EATNTETCHR NGDDNKDQEQ
301: HEDCSNGELD HQEQTLELFP LRKEGFCSDG EKDKNISGIH CFYEFLPLKN
101: DHIQQITAQL RRYGKIEGKN VFYWFQNHKA RERQKRRRQM ETGHEETVLS TASLVSNHGF DKKDPPGYKV EQVKNWICSV GCDTQPEKPS RDYHLEEPAN
201: IRVEHNARCG GDERRSFLGI NTTWQMMQLP PSFYSSSHHH HQRNLILNSP TVSSNMSNSN NAVSASKDTV TVSPVFLRTR EATNTETCHR NGDDNKDQEQ
301: HEDCSNGELD HQEQTLELFP LRKEGFCSDG EKDKNISGIH CFYEFLPLKN
Arabidopsis Description
WOX1WUSCHEL-related homeobox 1 [Source:UniProtKB/Swiss-Prot;Acc:Q6X7K0]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.