Factsheet for Bra001694.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
plastid 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY51928	Canola	nucleus	100.0	100.0
CDX75955	Canola	nucleus	96.32	97.14
Bra022267.1-P	Field mustard	nucleus	82.72	83.19
AT3G18010.1	Thale cress	nucleus	77.9	78.57
KRH60534	Soybean	nucleus	45.04	44.29
KRH41831	Soybean	nucleus	29.46	43.7
VIT_17s0000g02460.t01	Wine grape	nucleus	40.23	41.28
KRH48612	Soybean	nucleus	41.36	40.9
KRH39103	Soybean	nucleus	35.69	39.25
VIT_01s0011g05020.t01	Wine grape	nucleus	35.41	38.58
Solyc03g118770.2.1	Tomato	nucleus	39.94	35.88
PGSC0003DMT400014464	Potato	nucleus	39.38	35.55
Bra028749.1-P	Field mustard	nucleus	15.86	32.18
Bra017448.1-P	Field mustard	nucleus	24.36	31.16
Bra009132.1-P	Field mustard	nucleus	16.71	30.73
Bra026791.1-P	Field mustard	nucleus	20.68	28.19
KRG89341	Soybean	nucleus	26.35	27.6
KRH50388	Soybean	nucleus	25.78	27.33
Bra032212.1-P	Field mustard	nucleus	18.98	26.69
Bra014055.1-P	Field mustard	nucleus	18.98	26.07
Bra034855.1-P	Field mustard	mitochondrion	9.92	24.48
Bra000484.1-P	Field mustard	nucleus	15.58	24.34
Bra035688.1-P	Field mustard	nucleus	15.86	23.93
Bra002576.1-P	Field mustard	nucleus	12.75	21.43
Bra024485.1-P	Field mustard	nucleus	17.28	20.75
Bra039894.1-P	Field mustard	nucleus	17.0	19.87
Bra037245.1-P	Field mustard	nucleus	17.28	19.61
Bra012245.1-P	Field mustard	nucleus	7.37	19.55
Bra020321.1-P	Field mustard	nucleus	10.76	19.1
Bra025839.1-P	Field mustard	nucleus	9.63	16.75
Bra011623.1-P	Field mustard	nucleus	10.76	14.73
Bra010531.1-P	Field mustard	nucleus	9.35	13.98
Bra036446.1-P	Field mustard	nucleus	10.48	13.96
Bra002108.1-P	Field mustard	nucleus	10.48	13.55
Bra022960.1-P	Field mustard	nucleus	14.73	13.23
Bra017720.1-P	Field mustard	nucleus	9.92	13.21
Bra005464.1-P	Field mustard	nucleus	14.45	13.08
Bra022008.1-P	Field mustard	nucleus	11.33	12.99
Bra031980.1-P	Field mustard	nucleus	11.61	12.73
Bra023638.1-P	Field mustard	nucleus	9.92	12.73

Protein Annotations

Gene3D:1.10.10.60	MapMan:15.5.3.6	EnsemblPlantsGene:Bra001694	EnsemblPlants:Bra001694.1	EnsemblPlants:Bra001694.1-P	GO:GO:0003674
GO:GO:0003676	GO:GO:0003677	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	InterPro:Homeobox-like_sf	InterPro:Homeobox_dom	InterPro:IPR001356	UniProt:M4CBW4	PFAM:PF00046
PFscan:PS50071	PANTHER:PTHR24326	PANTHER:PTHR24326:SF224	SMART:SM00389	SUPFAM:SSF46689	UniParc:UPI000254046B
SEG:seg	:	:	:	:	:

Description

AT3G18010 (E=2e-145) WOX1 | WOX1 (WUSCHEL related homeobox 1); transcription factor

Coordinates

chrA03:-:17897095..17899123

Molecular Weight (calculated)

40199.8 Da

IEP (calculated)

7.443

GRAVY (calculated)

-1.040

Length

353 amino acids

Sequence
(BLAST)

001: MWMMGYNEGG ADSFNGGRKL RPLIPRLSSC PTATGNTNSD HRFNMAVVTT MTAEQNKREL MMLNSEPQHP PAMVSSRWNP TPDQLKALEE LYQQGTRTPS
101: ADHIQQITAQ LRRYGKIEGK NVFYWFQNHK ARERQKRRRQ MENGHDESVV TTTSLVSNQG FDKKDSKGYK VEHTKNWICS VGCDTQQEKP HDHHHQEEPV
201: SIAMVATKRN GRHGGDEIQS FPVRNARWHM MQLPPGLYPS SQQQHNNHQL NLNSTTVSLN LSTSNSNVPA AKDTVTFSPS FLRTRGARNT EACDDNKDQE
301: QHEDCSNGEL EHQEQTLELF PLRKEGFCSN GGDDGKEKES GIQCFYEFLP LKN

Best Arabidopsis Sequence Match ( AT3G18010.1 )
(BLAST)

001: MWTMGYNEGG ADSFNGGRKL RPLIPRLTSC PTAAVNTNSD HRFNMAVVTM TAEQNKRELM MLNSEPQHPP VMVSSRWNPT PDQLRVLEEL YRQGTRTPSA
101: DHIQQITAQL RRYGKIEGKN VFYWFQNHKA RERQKRRRQM ETGHEETVLS TASLVSNHGF DKKDPPGYKV EQVKNWICSV GCDTQPEKPS RDYHLEEPAN
201: IRVEHNARCG GDERRSFLGI NTTWQMMQLP PSFYSSSHHH HQRNLILNSP TVSSNMSNSN NAVSASKDTV TVSPVFLRTR EATNTETCHR NGDDNKDQEQ
301: HEDCSNGELD HQEQTLELFP LRKEGFCSDG EKDKNISGIH CFYEFLPLKN

Arabidopsis Description

WOX1WUSCHEL-related homeobox 1 [Source:UniProtKB/Swiss-Prot;Acc:Q6X7K0]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.