Factsheet for Bra014055.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
plastid 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus, plastid
BaCelLo:	nucleus
ChloroP:	plastid
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY17046	Canola	nucleus	98.83	99.22
AT1G46480.1	Thale cress	nucleus	83.27	85.26
Bra032212.1-P	Field mustard	nucleus	79.38	81.27
VIT_18s0001g10160.t01	Wine grape	nucleus	52.14	63.51
KRH15387	Soybean	nucleus	52.92	58.87
KRH61328	Soybean	nucleus	50.58	58.04
KRH52024	Soybean	nucleus	51.36	57.39
KRH05655	Soybean	nucleus	53.31	56.15
PGSC0003DMT400020662	Potato	nucleus	48.64	51.87
Solyc04g078650.2.1	Tomato	nucleus, plastid	48.64	51.65
Bra028749.1-P	Field mustard	nucleus	19.46	28.74
Bra009132.1-P	Field mustard	nucleus	19.46	26.04
Bra000484.1-P	Field mustard	nucleus	22.18	25.22
Bra035688.1-P	Field mustard	nucleus	21.79	23.93
Bra026791.1-P	Field mustard	nucleus	21.01	20.85
Bra034855.1-P	Field mustard	mitochondrion	10.89	19.58
Bra017448.1-P	Field mustard	nucleus	21.01	19.57
Bra012245.1-P	Field mustard	nucleus	10.12	19.55
Bra001694.1-P	Field mustard	nucleus	26.07	18.98
Bra022267.1-P	Field mustard	nucleus	25.29	18.52
Bra002576.1-P	Field mustard	nucleus	14.79	18.1
Bra024485.1-P	Field mustard	nucleus	20.62	18.03
Bra037245.1-P	Field mustard	nucleus	21.79	18.01
Bra025839.1-P	Field mustard	nucleus	14.01	17.73
Bra039894.1-P	Field mustard	nucleus	20.62	17.55
Bra020321.1-P	Field mustard	nucleus	12.84	16.58
Bra011623.1-P	Field mustard	nucleus	14.79	14.73
Bra017720.1-P	Field mustard	nucleus	15.18	14.72
Bra010531.1-P	Field mustard	nucleus	13.23	14.41
Bra036446.1-P	Field mustard	nucleus	13.62	13.21
Bra022008.1-P	Field mustard	nucleus	15.56	12.99
Bra002108.1-P	Field mustard	nucleus	13.23	12.45
Bra023638.1-P	Field mustard	nucleus	13.23	12.36
Bra022960.1-P	Field mustard	nucleus	17.9	11.7
Bra005464.1-P	Field mustard	nucleus	17.12	11.28
Bra031980.1-P	Field mustard	nucleus	13.23	10.56

Protein Annotations

Gene3D:1.10.10.60	MapMan:15.5.3.6	EnsemblPlantsGene:Bra014055	EnsemblPlants:Bra014055.1	EnsemblPlants:Bra014055.1-P	GO:GO:0003674
GO:GO:0003676	GO:GO:0003677	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	InterPro:Homeobox-like_sf	InterPro:Homeobox_dom	InterPro:IPR001356	UniProt:M4DC43	PFAM:PF00046
PFscan:PS50071	PANTHER:PTHR24326	PANTHER:PTHR24326:SF263	SMART:SM00389	SUPFAM:SSF46689	UniParc:UPI0002546AF9
SEG:seg	:	:	:	:	:

Description

AT1G46480 (E=4e-104) WOX4 | WOX4 (WUSCHEL RELATED HOMEOBOX 4); transcription factor

Coordinates

chrA08:+:4024047..4025092

Molecular Weight (calculated)

29201.2 Da

IEP (calculated)

9.719

GRAVY (calculated)

-0.851

Length

257 amino acids

Sequence
(BLAST)

001: MKVHEFSNGS SSWEQHDSPS SLSLSCKRLR PLAPKLSGSP CSPSSSSGVT SATFDLKSFI KPDQTGPRKF EYSIEHQRDL PQVETHQGGT RWNPTQEQIG
101: ILEMLYKGGM RTPNAQQIEH ITSQLGKYGK IEGKNVFYWF QNHKARERQK QKRNNFISLS CQSSFKTTNI NNASVTTKTT TTTSSFDVIR RDSMVEKGEL
201: VEETEYKRTG RSWGFENLEI DSRRNINSSK NATMATTFDK IIDNVTLELF PLYPEGR

Best Arabidopsis Sequence Match ( AT1G46480.1 )
(BLAST)

001: MKVHEFSNGF SSSWDQHDST SSLSLSCKRL RPLAPKLSGS PPSPPSSSSG VTSATFDLKN FIRPDQTGPT KFEHKRDPPH QLETHPGGTR WNPTQEQIGI
101: LEMLYKGGMR TPNAQQIEHI TLQLGKYGKI EGKNVFYWFQ NHKARERQKQ KRNNLISLSC QSSFTTTGVF NPSVTMKTRT SSSLDIMREP MVEKEELVEE
201: NEYKRTCRSW GFENLEIENR RNKNSSTMAT TFNKIIDNVT LELFPLHPEG R

Arabidopsis Description

WOX4WUSCHEL-related homeobox 4 [Source:UniProtKB/Swiss-Prot;Acc:Q6X7J9]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.