Factsheet for Bra032212.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
plastid 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus, plastid
BaCelLo:	nucleus
ChloroP:	plastid
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY02582	Canola	nucleus	47.01	97.52
AT1G46480.1	Thale cress	nucleus	82.87	82.87
Bra014055.1-P	Field mustard	nucleus	81.27	79.38
VIT_18s0001g10160.t01	Wine grape	nucleus	52.59	62.56
KRH15387	Soybean	nucleus	52.99	57.58
KRH61328	Soybean	nucleus	49.4	55.36
KRH52024	Soybean	nucleus	50.6	55.22
KRH05655	Soybean	nucleus	52.99	54.51
PGSC0003DMT400020662	Potato	nucleus	49.8	51.87
Solyc04g078650.2.1	Tomato	nucleus, plastid	49.8	51.65
Bra028749.1-P	Field mustard	nucleus	20.32	29.31
Bra009132.1-P	Field mustard	nucleus	20.32	26.56
Bra000484.1-P	Field mustard	nucleus	21.91	24.34
Bra035688.1-P	Field mustard	nucleus	21.51	23.08
Bra034855.1-P	Field mustard	mitochondrion	11.95	20.98
Bra012245.1-P	Field mustard	nucleus	10.76	20.3
Bra026791.1-P	Field mustard	nucleus	20.32	19.69
Bra017448.1-P	Field mustard	nucleus	21.51	19.57
Bra001694.1-P	Field mustard	nucleus	26.69	18.98
Bra022267.1-P	Field mustard	nucleus	25.9	18.52
Bra024485.1-P	Field mustard	nucleus	21.51	18.37
Bra002576.1-P	Field mustard	nucleus	14.74	17.62
Bra037245.1-P	Field mustard	nucleus	21.51	17.36
Bra025839.1-P	Field mustard	nucleus	13.94	17.24
Bra039894.1-P	Field mustard	nucleus	20.72	17.22
Bra020321.1-P	Field mustard	nucleus	12.75	16.08
Bra011623.1-P	Field mustard	nucleus	14.74	14.34
Bra017720.1-P	Field mustard	nucleus	15.14	14.34
Bra036446.1-P	Field mustard	nucleus	14.34	13.58
Bra010531.1-P	Field mustard	nucleus	12.75	13.56
Bra022008.1-P	Field mustard	nucleus	15.54	12.66
Bra005464.1-P	Field mustard	nucleus	18.33	11.79
Bra002108.1-P	Field mustard	nucleus	12.75	11.72
Bra022960.1-P	Field mustard	nucleus	18.33	11.7
Bra023638.1-P	Field mustard	nucleus	12.35	11.27
Bra031980.1-P	Field mustard	nucleus	14.34	11.18

Protein Annotations

Gene3D:1.10.10.60	MapMan:15.5.3.6	EnsemblPlantsGene:Bra032212	EnsemblPlants:Bra032212.1	EnsemblPlants:Bra032212.1-P	GO:GO:0003674
GO:GO:0003676	GO:GO:0003677	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	InterPro:Homeobox-like_sf	InterPro:Homeobox_dom	InterPro:IPR001356	UniProt:M4ETT0	PFAM:PF00046
PFscan:PS50071	PANTHER:PTHR24326	PANTHER:PTHR24326:SF263	SMART:SM00389	SUPFAM:SSF46689	UniParc:UPI0002547D9F
SEG:seg	:	:	:	:	:

Description

AT1G46480 (E=5e-096) WOX4 | WOX4 (WUSCHEL RELATED HOMEOBOX 4); transcription factor

Coordinates

chrA05:+:12882318..12883391

Molecular Weight (calculated)

28556.6 Da

IEP (calculated)

10.220

GRAVY (calculated)

-0.847

Length

251 amino acids

Sequence
(BLAST)

001: MKVHEFSNGF SSWEQQQESP SSFSCKRFRP LAPKLSGSPS SPPSSSSGVT SATFDLKSFI KPDQAAPTKS HYSLEHKRDF SQVEMHPGGT RWNPTQEQIK
101: ILEILYKGGM RTPNAQQIEH ITSQLGKYGK IEGKNVFYWF QNHKARERQK QKRNNLSLSC QGSLSTTSVS NASVTMKTRT SSSPDFKREP MVMKELLEEN
201: EYKRTCRSWG FENLKIESRR NINSSINATI ATTFNIDNVT LELFPLHPEG R

Best Arabidopsis Sequence Match ( AT1G46480.1 )
(BLAST)

001: MKVHEFSNGF SSSWDQHDST SSLSLSCKRL RPLAPKLSGS PPSPPSSSSG VTSATFDLKN FIRPDQTGPT KFEHKRDPPH QLETHPGGTR WNPTQEQIGI
101: LEMLYKGGMR TPNAQQIEHI TLQLGKYGKI EGKNVFYWFQ NHKARERQKQ KRNNLISLSC QSSFTTTGVF NPSVTMKTRT SSSLDIMREP MVEKEELVEE
201: NEYKRTCRSW GFENLEIENR RNKNSSTMAT TFNKIIDNVT LELFPLHPEG R

Arabidopsis Description

WOX4WUSCHEL-related homeobox 4 [Source:UniProtKB/Swiss-Prot;Acc:Q6X7J9]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.