Factsheet for Bra026791.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX81686	Canola	nucleus	98.07	87.59
CDY33728	Canola	nucleus	81.85	77.09
AT2G01500.1	Thale cress	nucleus	34.75	33.21
Bra017448.1-P	Field mustard	nucleus	32.05	30.07
Bra028749.1-P	Field mustard	nucleus	18.53	27.59
Bra009132.1-P	Field mustard	nucleus	19.3	26.04
Bra035688.1-P	Field mustard	nucleus	22.01	24.36
Bra000484.1-P	Field mustard	nucleus	20.46	23.45
Bra034855.1-P	Field mustard	mitochondrion	12.74	23.08
Bra014055.1-P	Field mustard	nucleus	20.85	21.01
Bra001694.1-P	Field mustard	nucleus	28.19	20.68
Bra032212.1-P	Field mustard	nucleus	19.69	20.32
Bra022267.1-P	Field mustard	nucleus	25.87	19.09
Bra012245.1-P	Field mustard	nucleus	9.27	18.05
Bra039894.1-P	Field mustard	nucleus	20.85	17.88
Bra037245.1-P	Field mustard	nucleus	20.85	17.36
Bra024485.1-P	Field mustard	nucleus	18.92	16.67
Bra002576.1-P	Field mustard	nucleus	12.36	15.24
Bra020321.1-P	Field mustard	nucleus	11.58	15.08
Bra022008.1-P	Field mustard	nucleus	16.22	13.64
Bra025839.1-P	Field mustard	nucleus	10.42	13.3
Bra036446.1-P	Field mustard	nucleus	13.51	13.21
Bra002108.1-P	Field mustard	nucleus	12.74	12.09
Bra011623.1-P	Field mustard	nucleus	11.97	12.02
Bra022960.1-P	Field mustard	nucleus	17.76	11.7
Bra023638.1-P	Field mustard	nucleus	12.36	11.64
Bra010531.1-P	Field mustard	nucleus	10.42	11.44
Bra005464.1-P	Field mustard	nucleus	16.99	11.28
Bra031980.1-P	Field mustard	nucleus	13.9	11.18
Bra017720.1-P	Field mustard	nucleus	11.2	10.94

Protein Annotations

Gene3D:1.10.10.60	MapMan:15.5.3.6	EnsemblPlantsGene:Bra026791	EnsemblPlants:Bra026791.1	EnsemblPlants:Bra026791.1-P	GO:GO:0003674
GO:GO:0003676	GO:GO:0003677	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	InterPro:Homeobox-like_sf	InterPro:Homeobox_dom	InterPro:IPR001356	UniProt:M4EDD1	PFAM:PF00046
PFscan:PS50071	PANTHER:PTHR24326	PANTHER:PTHR24326:SF509	SMART:SM00389	SUPFAM:SSF46689	UniParc:UPI0002542D28
SEG:seg	:	:	:	:	:

Description

AT2G01500 (E=1e-028) PFS2, WOX6, HOS9 | PFS2 (PRETTY FEW SEEDS 2); transcription factor

Coordinates

chrA09:-:33709378..33710531

Molecular Weight (calculated)

30662.3 Da

IEP (calculated)

5.478

GRAVY (calculated)

-1.355

Length

259 amino acids

Sequence
(BLAST)

001: MNDIRNDEQI ITESAGEPKE REKYMHSRWN PTPEQTMVLE EVYSSGTRTP TTQQIQEIAS KLQKYGRIEG KNVFYWFQNH KSRERLKRRR GDQQGVTTIS
101: NVHEETLRKD NVIVDTANKD SSSVSRRRGD HRVIHTRTCL SPSPTHPPKN SIDDGKREEY KRGLEEEKET TSQNQIHPSN TSDFNYHLIT ASKPSQEEEQ
201: QYKLNDDEEE EEETRKSRTL DLFPVIENQE TIDFEEKNTK PNQLYCNYCY YYEFMPLMN

Best Arabidopsis Sequence Match ( AT2G01500.1 )
(BLAST)

001: MGYISNNNLI NYLPLSTTQP PLLLTHCDIN GNDHHQLITA SSGEHDIDER KNNIPAAATL RWNPTPEQIT TLEELYRSGT RTPTTEQIQQ IASKLRKYGR
101: IEGKNVFYWF QNHKARERLK RRRREGGAII KPHKDVKDSS SGGHRVDQTK LCPSFPHTNR PQPQHELDPA SYNKDNNANN EDHGTTEESD QRASEVGKYA
201: TWRNLVTWSI TQQPEEINID ENVNGEEEET RDNRTLNLFP VREYQEKTGR LIEKTKACNY CYYYEFMPLK N

Arabidopsis Description

WOX6WUSCHEL-related homeobox 6 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZVF5]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.