Factsheet for Bra020321.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY32648	Canola	nucleus	86.93	98.86
Bra002576.1-P	Field mustard	nucleus	76.88	72.86
AT5G59340.1	Thale cress	nucleus	74.87	57.31
KRH23053	Soybean	nucleus	27.14	25.47
KRH10279	Soybean	nucleus	26.63	24.2
Solyc06g076000.1.1	Tomato	nucleus	28.14	23.33
PGSC0003DMT400077947	Potato	nucleus	27.64	23.31
GSMUA_Achr10P...	Banana	nucleus	25.63	21.89
Bra034855.1-P	Field mustard	mitochondrion	15.08	20.98
KRH29810	Soybean	nucleus	27.14	20.69
Bra028749.1-P	Field mustard	nucleus	16.58	18.97
KRH24809	Soybean	nucleus	29.15	17.74
Bra000484.1-P	Field mustard	nucleus	19.6	17.26
Bra009132.1-P	Field mustard	nucleus	16.58	17.19
Bra035688.1-P	Field mustard	nucleus	17.59	14.96
Bra017448.1-P	Field mustard	nucleus	18.59	13.41
Bra014055.1-P	Field mustard	nucleus	16.58	12.84
Bra032212.1-P	Field mustard	nucleus	16.08	12.75
Bra026791.1-P	Field mustard	nucleus	15.08	11.58
Bra012245.1-P	Field mustard	nucleus	7.54	11.28
Bra022267.1-P	Field mustard	nucleus	19.1	10.83
Bra001694.1-P	Field mustard	nucleus	19.1	10.76
Bra024485.1-P	Field mustard	nucleus	15.58	10.54
Bra037245.1-P	Field mustard	nucleus	16.08	10.29
Bra039894.1-P	Field mustard	nucleus	15.58	10.26
Bra036446.1-P	Field mustard	nucleus	12.56	9.43
Bra022008.1-P	Field mustard	nucleus	13.57	8.77
Bra010531.1-P	Field mustard	nucleus	10.05	8.47
Bra002108.1-P	Field mustard	nucleus	11.56	8.42
Bra025839.1-P	Field mustard	nucleus	8.54	8.37
Bra023638.1-P	Field mustard	nucleus	11.56	8.36
Bra011623.1-P	Field mustard	nucleus	10.55	8.14
Bra017720.1-P	Field mustard	nucleus	10.55	7.92
Bra031980.1-P	Field mustard	nucleus	12.06	7.45
Bra022960.1-P	Field mustard	nucleus	13.07	6.62
Bra005464.1-P	Field mustard	nucleus	12.06	6.15

Protein Annotations

EnsemblPlants:Bra020321.1	EnsemblPlants:Bra020321.1-P	EnsemblPlantsGene:Bra020321	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	InterPro:Homeobox_dom
InterPro:IPR001356	PANTHER:PTHR24326	PANTHER:PTHR24326:SF203	PFAM:PF00046	SEG:seg	UniParc:UPI000254366F
UniProt:M4DUX8	MapMan:35.1	:	:	:	:

Description

AT5G59340 (E=6e-048) WOX2 | WOX2 (WUSCHEL RELATED HOMEOBOX 2); transcription factor

Coordinates

chrA02:+:6210628..6211676

Molecular Weight (calculated)

21581.9 Da

IEP (calculated)

6.878

GRAVY (calculated)

-0.706

Length

199 amino acids

Sequence
(BLAST)

001: MEKEGKVGTA SSSRWNPTKE QITLLENLYK EGIRTPSADQ IQQITVGCVS PYYLQQVGDH HNQHGHGSVY RHSNNVMNPN GGYDKRTITD HKKQLSDITT
101: TAARLSMSSS SLRFDRFALC DHGYNGEDIN VNSNGPKTLS LFPLQPLDAA SEDGVGNSKI SPGRDSPVTC FGDGGGREQP FIDFFSGGSS RFANGANGL

Best Arabidopsis Sequence Match ( AT5G59340.1 )
(BLAST)

001: MENEVNAGTA SSSRWNPTKD QITLLENLYK EGIRTPSADQ IQQITGRLRA YGHIEGKNVF YWFQNHKARQ RQKQKQERMA YFNRLLHKTS RFFYPPPCSN
101: VGCVSPYYLQ QASDHHMNQH GSVYTNDLLH RNNVMIPSGG YEKRTVTQHQ KQLSDIRTTA ATRMPISPSS LRFDRFALRD NCYAGEDINV NSSGRKTLPL
201: FPLQPLNASN ADGMGSSSFA LGSDSPVDCS SDGAGREQPF IDFFSGGSTS TRFDSNGNGL

Arabidopsis Description

WOX2WUSCHEL-related homeobox 2 [Source:UniProtKB/Swiss-Prot;Acc:Q6X7K1]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.