Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
Predictors | GFP | MS/MS | Papers | ||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
CDY32648 | Canola | nucleus | 51.92 | 77.14 |
CDY02885 | Canola | nucleus | 58.08 | 75.88 |
Bra020321.1-P | Field mustard | nucleus | 57.31 | 74.87 |
CDX80277 | Canola | nucleus | 58.08 | 71.9 |
CDY33030 | Canola | nucleus | 57.69 | 71.43 |
Bra002576.1-P | Field mustard | nucleus | 57.69 | 71.43 |
KRH23053 | Soybean | nucleus | 36.15 | 44.34 |
PGSC0003DMT400077947 | Potato | nucleus | 38.46 | 42.37 |
Solyc06g076000.1.1 | Tomato | nucleus | 38.85 | 42.08 |
KRH10279 | Soybean | nucleus | 34.62 | 41.1 |
KRH29810 | Soybean | nucleus | 38.08 | 37.93 |
GSMUA_Achr10P... | Banana | nucleus | 32.69 | 36.48 |
AT5G05770.1 | Thale cress | nucleus | 16.54 | 35.25 |
KRH24809 | Soybean | nucleus | 39.62 | 31.5 |
AT3G11260.1 | Thale cress | nucleus | 18.46 | 26.37 |
AT2G28610.1 | Thale cress | nucleus | 23.46 | 25.0 |
AT1G46480.1 | Thale cress | nucleus | 21.92 | 22.71 |
AT2G01500.1 | Thale cress | nucleus | 22.69 | 21.77 |
AT2G17950.1 | Thale cress | nucleus | 21.15 | 18.84 |
AT3G18010.1 | Thale cress | nucleus | 23.85 | 17.71 |
AT1G20710.1 | Thale cress | nucleus | 13.08 | 17.26 |
AT1G20700.1 | Thale cress | nucleus | 11.54 | 14.22 |
AT4G35550.1 | Thale cress | nucleus | 13.46 | 13.06 |
AT5G45980.1 | Thale cress | nucleus | 15.0 | 12.0 |
AT5G17810.2 | Thale cress | nucleus | 11.92 | 11.57 |
AT3G03660.3 | Thale cress | nucleus, plastid | 12.31 | 9.82 |
AT2G33880.2 | Thale cress | nucleus | 14.23 | 9.54 |
Protein Annotations
Gene3D:1.10.10.60 | MapMan:15.5.3.6 | EntrezGene:836053 | EMBL:AB493799 | ProteinID:AED97173.1 | ArrayExpress:AT5G59340 |
EnsemblPlantsGene:AT5G59340 | RefSeq:AT5G59340 | TAIR:AT5G59340 | RefSeq:AT5G59340-TAIR-G | EnsemblPlants:AT5G59340.1 | TAIR:AT5G59340.1 |
EMBL:AY251392 | EMBL:AY251393 | ProteinID:BAB09778.1 | UniProt:C0SVU6 | GO:GO:0000003 | GO:GO:0003674 |
GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 |
GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0007275 |
GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008284 | GO:GO:0009058 | GO:GO:0009628 | GO:GO:0009653 |
GO:GO:0009790 | GO:GO:0009791 | GO:GO:0009880 | GO:GO:0009942 | GO:GO:0009987 | GO:GO:0010654 |
GO:GO:0030154 | GO:GO:0048825 | GO:GO:0080167 | GO:GO:0090451 | InterPro:Homeobox-like_sf | InterPro:Homeobox_dom |
InterPro:IPR001356 | RefSeq:NP_200742.2 | PFAM:PF00046 | PO:PO:0000037 | PO:PO:0000423 | PO:PO:0001054 |
PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 |
PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009006 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009032 |
PO:PO:0009046 | PO:PO:0009047 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020094 | PO:PO:0020100 |
PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025284 | PFscan:PS50071 | PANTHER:PTHR24326 | PANTHER:PTHR24326:SF203 |
UniProt:Q6X7K1 | SMART:SM00389 | SUPFAM:SSF46689 | UniParc:UPI0000232EDA | Symbol:WOX2 | SEG:seg |
Description
WOX2WUSCHEL-related homeobox 2 [Source:UniProtKB/Swiss-Prot;Acc:Q6X7K1]
Coordinates
chr5:-:23933338..23935050
Molecular Weight (calculated)
29185.0 Da
IEP (calculated)
9.308
GRAVY (calculated)
-0.764
Length
260 amino acids
Sequence
(BLAST)
(BLAST)
001: MENEVNAGTA SSSRWNPTKD QITLLENLYK EGIRTPSADQ IQQITGRLRA YGHIEGKNVF YWFQNHKARQ RQKQKQERMA YFNRLLHKTS RFFYPPPCSN
101: VGCVSPYYLQ QASDHHMNQH GSVYTNDLLH RNNVMIPSGG YEKRTVTQHQ KQLSDIRTTA ATRMPISPSS LRFDRFALRD NCYAGEDINV NSSGRKTLPL
201: FPLQPLNASN ADGMGSSSFA LGSDSPVDCS SDGAGREQPF IDFFSGGSTS TRFDSNGNGL
101: VGCVSPYYLQ QASDHHMNQH GSVYTNDLLH RNNVMIPSGG YEKRTVTQHQ KQLSDIRTTA ATRMPISPSS LRFDRFALRD NCYAGEDINV NSSGRKTLPL
201: FPLQPLNASN ADGMGSSSFA LGSDSPVDCS SDGAGREQPF IDFFSGGSTS TRFDSNGNGL
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.