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Thale cress
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • nucleus 4
  • mitochondrion 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY32648 Canola nucleus 51.92 77.14
CDY02885 Canola nucleus 58.08 75.88
Bra020321.1-P Field mustard nucleus 57.31 74.87
CDX80277 Canola nucleus 58.08 71.9
CDY33030 Canola nucleus 57.69 71.43
Bra002576.1-P Field mustard nucleus 57.69 71.43
KRH23053 Soybean nucleus 36.15 44.34
PGSC0003DMT400077947 Potato nucleus 38.46 42.37
Solyc06g076000.1.1 Tomato nucleus 38.85 42.08
KRH10279 Soybean nucleus 34.62 41.1
KRH29810 Soybean nucleus 38.08 37.93
GSMUA_Achr10P... Banana nucleus 32.69 36.48
AT5G05770.1 Thale cress nucleus 16.54 35.25
KRH24809 Soybean nucleus 39.62 31.5
AT3G11260.1 Thale cress nucleus 18.46 26.37
AT2G28610.1 Thale cress nucleus 23.46 25.0
AT1G46480.1 Thale cress nucleus 21.92 22.71
AT2G01500.1 Thale cress nucleus 22.69 21.77
AT2G17950.1 Thale cress nucleus 21.15 18.84
AT3G18010.1 Thale cress nucleus 23.85 17.71
AT1G20710.1 Thale cress nucleus 13.08 17.26
AT1G20700.1 Thale cress nucleus 11.54 14.22
AT4G35550.1 Thale cress nucleus 13.46 13.06
AT5G45980.1 Thale cress nucleus 15.0 12.0
AT5G17810.2 Thale cress nucleus 11.92 11.57
AT3G03660.3 Thale cress nucleus, plastid 12.31 9.82
AT2G33880.2 Thale cress nucleus 14.23 9.54
Protein Annotations
Gene3D:1.10.10.60MapMan:15.5.3.6EntrezGene:836053EMBL:AB493799ProteinID:AED97173.1ArrayExpress:AT5G59340
EnsemblPlantsGene:AT5G59340RefSeq:AT5G59340TAIR:AT5G59340RefSeq:AT5G59340-TAIR-GEnsemblPlants:AT5G59340.1TAIR:AT5G59340.1
EMBL:AY251392EMBL:AY251393ProteinID:BAB09778.1UniProt:C0SVU6GO:GO:0000003GO:GO:0003674
GO:GO:0003676GO:GO:0003677GO:GO:0003700GO:GO:0005488GO:GO:0005575GO:GO:0005622
GO:GO:0005623GO:GO:0005634GO:GO:0006139GO:GO:0006351GO:GO:0006355GO:GO:0007275
GO:GO:0008150GO:GO:0008152GO:GO:0008284GO:GO:0009058GO:GO:0009628GO:GO:0009653
GO:GO:0009790GO:GO:0009791GO:GO:0009880GO:GO:0009942GO:GO:0009987GO:GO:0010654
GO:GO:0030154GO:GO:0048825GO:GO:0080167GO:GO:0090451InterPro:Homeobox-like_sfInterPro:Homeobox_dom
InterPro:IPR001356RefSeq:NP_200742.2PFAM:PF00046PO:PO:0000037PO:PO:0000423PO:PO:0001054
PO:PO:0007064PO:PO:0007095PO:PO:0007103PO:PO:0007115PO:PO:0007123PO:PO:0007611
PO:PO:0007616PO:PO:0008019PO:PO:0009006PO:PO:0009025PO:PO:0009029PO:PO:0009032
PO:PO:0009046PO:PO:0009047PO:PO:0020030PO:PO:0020038PO:PO:0020094PO:PO:0020100
PO:PO:0020137PO:PO:0025022PO:PO:0025284PFscan:PS50071PANTHER:PTHR24326PANTHER:PTHR24326:SF203
UniProt:Q6X7K1SMART:SM00389SUPFAM:SSF46689UniParc:UPI0000232EDASymbol:WOX2SEG:seg
Description
WOX2WUSCHEL-related homeobox 2 [Source:UniProtKB/Swiss-Prot;Acc:Q6X7K1]
Coordinates
chr5:-:23933338..23935050
Molecular Weight (calculated)
29185.0 Da
IEP (calculated)
9.308
GRAVY (calculated)
-0.764
Length
260 amino acids
Sequence
(BLAST)
001: MENEVNAGTA SSSRWNPTKD QITLLENLYK EGIRTPSADQ IQQITGRLRA YGHIEGKNVF YWFQNHKARQ RQKQKQERMA YFNRLLHKTS RFFYPPPCSN
101: VGCVSPYYLQ QASDHHMNQH GSVYTNDLLH RNNVMIPSGG YEKRTVTQHQ KQLSDIRTTA ATRMPISPSS LRFDRFALRD NCYAGEDINV NSSGRKTLPL
201: FPLQPLNASN ADGMGSSSFA LGSDSPVDCS SDGAGREQPF IDFFSGGSTS TRFDSNGNGL
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.