Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY29212 | Canola | nucleus | 77.05 | 76.53 |
| Bra024485.1-P | Field mustard | nucleus | 76.03 | 75.51 |
| Bra037245.1-P | Field mustard | nucleus | 80.14 | 75.24 |
| CDY55370 | Canola | nucleus | 77.74 | 75.17 |
| CDY38144 | Canola | nucleus | 77.4 | 74.83 |
| Bra039894.1-P | Field mustard | nucleus | 77.05 | 74.5 |
| CDY30337 | Canola | nucleus | 80.14 | 74.05 |
| CDY47803 | Canola | nucleus | 76.03 | 73.51 |
| GSMUA_Achr7P07430_001 | Banana | nucleus | 24.32 | 49.65 |
| VIT_04s0023g03310.t01 | Wine grape | nucleus | 41.78 | 43.57 |
| KRH28790 | Soybean | nucleus | 42.12 | 42.56 |
| KRH76665 | Soybean | nucleus | 42.12 | 41.55 |
| Solyc02g083950.2.1 | Tomato | nucleus | 34.59 | 37.13 |
| PGSC0003DMT400009157 | Potato | nucleus | 34.93 | 35.54 |
| AT5G05770.1 | Thale cress | nucleus | 14.04 | 33.61 |
| AT3G11260.1 | Thale cress | nucleus | 19.52 | 31.32 |
| AT2G28610.1 | Thale cress | nucleus | 19.86 | 23.77 |
| AT2G01500.1 | Thale cress | nucleus | 19.86 | 21.4 |
| AT5G59340.1 | Thale cress | nucleus | 18.84 | 21.15 |
| AT1G46480.1 | Thale cress | nucleus | 18.15 | 21.12 |
| AT3G18010.1 | Thale cress | nucleus | 21.23 | 17.71 |
| AT1G20710.1 | Thale cress | nucleus | 10.96 | 16.24 |
| AT1G20700.1 | Thale cress | nucleus | 10.62 | 14.69 |
| AT5G17810.2 | Thale cress | nucleus | 13.01 | 14.18 |
| AT5G45980.1 | Thale cress | nucleus | 15.07 | 13.54 |
| AT4G35550.1 | Thale cress | nucleus | 12.33 | 13.43 |
| AT2G33880.2 | Thale cress | nucleus | 16.44 | 12.37 |
| AT3G03660.3 | Thale cress | nucleus, plastid | 13.01 | 11.66 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.3.6 | EntrezGene:816305 | ProteinID:AAD20131.2 | ProteinID:AEC06704.1 | EMBL:AJ012310 |
| ArrayExpress:AT2G17950 | EnsemblPlantsGene:AT2G17950 | RefSeq:AT2G17950 | TAIR:AT2G17950 | RefSeq:AT2G17950-TAIR-G | EnsemblPlants:AT2G17950.1 |
| TAIR:AT2G17950.1 | EMBL:AY086385 | Unigene:At.51 | EMBL:BT028901 | EMBL:DQ446515 | GO:GO:0000003 |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 |
| GO:GO:0006355 | GO:GO:0007275 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009653 |
| GO:GO:0009791 | GO:GO:0009908 | GO:GO:0009987 | GO:GO:0019827 | GO:GO:0030154 | GO:GO:0048653 |
| GO:GO:0080166 | GO:GO:0090506 | InterPro:Homeobox-like_sf | InterPro:Homeobox_dom | InterPro:IPR001356 | RefSeq:NP_565429.1 |
| PFAM:PF00046 | PO:PO:0000229 | PO:PO:0001078 | PO:PO:0004507 | PO:PO:0007611 | PO:PO:0007616 |
| PO:PO:0009009 | PO:PO:0009029 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009049 |
| PO:PO:0009062 | PO:PO:0020003 | PO:PO:0020020 | PO:PO:0020101 | PO:PO:0020148 | PO:PO:0025022 |
| PFscan:PS50071 | PANTHER:PTHR24326 | PANTHER:PTHR24326:SF510 | UniProt:Q1PF51 | UniProt:Q9SB92 | SMART:SM00389 |
| SUPFAM:SSF46689 | UniParc:UPI00000A8CEB | Symbol:WUS | SEG:seg | : | : |
Description
WUSProtein WUSCHEL [Source:UniProtKB/Swiss-Prot;Acc:Q9SB92]
Coordinates
chr2:-:7808871..7810811
Molecular Weight (calculated)
33191.4 Da
IEP (calculated)
8.046
GRAVY (calculated)
-1.038
Length
292 amino acids
Sequence
(BLAST)
(BLAST)
001: MEPPQHQHHH HQADQESGNN NNNKSGSGGY TCRQTSTRWT PTTEQIKILK ELYYNNAIRS PTADQIQKIT ARLRQFGKIE GKNVFYWFQN HKARERQKKR
101: FNGTNMTTPS SSPNSVMMAA NDHYHPLLHH HHGVPMQRPA NSVNVKLNQD HHLYHHNKPY PSFNNGNLNH ASSGTECGVV NASNGYMSSH VYGSMEQDCS
201: MNYNNVGGGW ANMDHHYSSA PYNFFDRAKP LFGLEGHQEE EECGGDAYLE HRRTLPLFPM HGEDHINGGS GAIWKYGQSE VRPCASLELR LN
101: FNGTNMTTPS SSPNSVMMAA NDHYHPLLHH HHGVPMQRPA NSVNVKLNQD HHLYHHNKPY PSFNNGNLNH ASSGTECGVV NASNGYMSSH VYGSMEQDCS
201: MNYNNVGGGW ANMDHHYSSA PYNFFDRAKP LFGLEGHQEE EECGGDAYLE HRRTLPLFPM HGEDHINGGS GAIWKYGQSE VRPCASLELR LN
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.