Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- plastid 2
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY38461 | Canola | nucleus | 77.24 | 75.55 |
| Bra023638.1-P | Field mustard | nucleus | 76.87 | 74.91 |
| Bra002108.1-P | Field mustard | nucleus | 75.75 | 74.36 |
| CDY16883 | Canola | nucleus | 76.49 | 74.28 |
| CDY02686 | Canola | nucleus | 77.24 | 73.14 |
| CDY66087 | Canola | nucleus | 75.75 | 72.5 |
| AT3G03660.3 | Thale cress | nucleus, plastid | 67.91 | 55.83 |
| VIT_08s0056g01200.t01 | Wine grape | nucleus | 47.76 | 54.24 |
| PGSC0003DMT400069529 | Potato | nucleus | 45.9 | 50.2 |
| KRG94925 | Soybean | nucleus | 50.0 | 47.86 |
| Solyc06g072890.1.1 | Tomato | nucleus | 45.9 | 46.59 |
| KRH64971 | Soybean | nucleus | 50.37 | 45.76 |
| GSMUA_Achr10P... | Banana | nucleus | 41.42 | 45.49 |
| Os07t0684900-01 | Rice | nucleus | 44.4 | 45.42 |
| TraesCS2B01G117900.1 | Wheat | nucleus | 43.66 | 44.83 |
| TraesCS2D01G100200.1 | Wheat | nucleus | 43.66 | 44.32 |
| TraesCS2A01G100700.1 | Wheat | nucleus | 43.66 | 44.15 |
| Zm00001d022524_P001 | Maize | nucleus | 42.16 | 43.63 |
| TraesCS4A01G130200.1 | Wheat | nucleus | 46.64 | 40.72 |
| TraesCS4D01G176400.1 | Wheat | nucleus | 46.27 | 40.52 |
| TraesCS4B01G174400.1 | Wheat | nucleus | 46.64 | 40.45 |
| Zm00001d047559_P001 | Maize | nucleus | 47.39 | 40.32 |
| KXG39473 | Sorghum | nucleus | 47.01 | 40.13 |
| TraesCS3A01G073500.1 | Wheat | nucleus | 37.69 | 38.85 |
| TraesCS3D01G073300.1 | Wheat | nucleus | 37.69 | 38.7 |
| KXG24798 | Sorghum | nucleus | 39.55 | 38.41 |
| Os08t0242400-01 | Rice | nucleus | 40.67 | 38.38 |
| HORVU3Hr1G013290.3 | Barley | nucleus | 37.31 | 38.31 |
| Zm00001d028986_P001 | Maize | nucleus | 45.9 | 38.08 |
| TraesCS3B01G087800.1 | Wheat | nucleus | 36.94 | 37.93 |
| GSMUA_Achr10P... | Banana | nucleus | 36.94 | 37.22 |
| GSMUA_Achr3P09460_001 | Banana | nucleus | 43.66 | 36.56 |
| OQU90491 | Sorghum | nucleus | 34.7 | 35.77 |
| GSMUA_Achr6P15910_001 | Banana | nucleus | 41.79 | 35.33 |
| HORVU3Hr1G013330.1 | Barley | nucleus | 25.37 | 35.05 |
| Zm00001d024410_P001 | Maize | nucleus | 37.69 | 34.35 |
| Os03t0325600-01 | Rice | nucleus | 44.78 | 33.71 |
| GSMUA_Achr5P27730_001 | Banana | nucleus | 39.18 | 33.65 |
| GSMUA_Achr9P05010_001 | Banana | nucleus, plastid | 42.91 | 31.68 |
| HORVU4Hr1G051530.5 | Barley | nucleus | 35.82 | 27.83 |
| GSMUA_Achr8P01590_001 | Banana | nucleus | 41.42 | 26.43 |
| AT5G45980.1 | Thale cress | nucleus | 29.85 | 24.62 |
| AT2G33880.2 | Thale cress | nucleus | 32.09 | 22.16 |
| AT5G05770.1 | Thale cress | nucleus | 9.33 | 20.49 |
| AT3G11260.1 | Thale cress | nucleus | 11.94 | 17.58 |
| AT1G20700.1 | Thale cress | nucleus | 13.43 | 17.06 |
| AT1G20710.1 | Thale cress | nucleus | 12.31 | 16.75 |
| AT4G35550.1 | Thale cress | nucleus | 14.55 | 14.55 |
| AT2G01500.1 | Thale cress | nucleus | 13.43 | 13.28 |
| AT2G17950.1 | Thale cress | nucleus | 14.18 | 13.01 |
| AT1G46480.1 | Thale cress | nucleus | 11.94 | 12.75 |
| AT2G28610.1 | Thale cress | nucleus | 11.19 | 12.3 |
| AT5G59340.1 | Thale cress | nucleus | 11.57 | 11.92 |
| AT3G18010.1 | Thale cress | nucleus | 13.06 | 10.0 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.3.6 | EntrezGene:831649 | UniProt:A0A178U995 | ProteinID:AED92472.1 | ProteinID:AED92473.1 |
| EMBL:AK117910 | ArrayExpress:AT5G17810 | EnsemblPlantsGene:AT5G17810 | RefSeq:AT5G17810 | TAIR:AT5G17810 | RefSeq:AT5G17810-TAIR-G |
| EnsemblPlants:AT5G17810.2 | TAIR:AT5G17810.2 | EMBL:AY251403 | Unigene:At.31506 | ProteinID:BAB09580.1 | EMBL:BT006232 |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 |
| GO:GO:0007275 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0048830 |
| InterPro:Homeobox-like_sf | InterPro:Homeobox_dom | InterPro:IPR001356 | RefSeq:NP_001190327.1 | RefSeq:NP_197283.2 | ProteinID:OAO90179.1 |
| PFAM:PF00046 | PFscan:PS50071 | PANTHER:PTHR24326 | PANTHER:PTHR24326:SF185 | UniProt:Q8GY25 | SMART:SM00389 |
| SUPFAM:SSF46689 | UniParc:UPI00000ADE45 | Symbol:WOX12 | SEG:seg | : | : |
Description
WOX12WUSCHEL-related homeobox 12 [Source:UniProtKB/Swiss-Prot;Acc:Q8GY25]
Coordinates
chr5:-:5880443..5884770
Molecular Weight (calculated)
29715.6 Da
IEP (calculated)
6.571
GRAVY (calculated)
-0.579
Length
268 amino acids
Sequence
(BLAST)
(BLAST)
001: MNQEGASHSP SSTSTEPVRA RWSPKPEQIL ILESIFNSGT VNPPKDETVR IRKMLEKFGA VGDANVFYWF QNRRSRSRRR HRQLLAATTA AATSIGAEDH
101: QHMTAMSMHQ YPCSNNEIDL GFGSCSNLSA NYFLNGSSSS QIPSFFLGLS SSSGGCENNN GMENLFKMYG HESDHNHQQQ HHSSNAASVL NPSDQNSNSQ
201: YEQEGFMTVF INGVPMEVTK GAIDMKTMFG DDSVLLHSSG LPLPTDEFGF LMHSLQHGQT YFLVPRQT
101: QHMTAMSMHQ YPCSNNEIDL GFGSCSNLSA NYFLNGSSSS QIPSFFLGLS SSSGGCENNN GMENLFKMYG HESDHNHQQQ HHSSNAASVL NPSDQNSNSQ
201: YEQEGFMTVF INGVPMEVTK GAIDMKTMFG DDSVLLHSSG LPLPTDEFGF LMHSLQHGQT YFLVPRQT
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.