Factsheet for GSMUA_Achr10P12820_001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os07t0684900-01	Rice	nucleus	61.89	57.63
TraesCS2B01G117900.1	Wheat	nucleus	60.25	56.32
TraesCS2A01G100700.1	Wheat	nucleus	60.66	55.85
TraesCS2D01G100200.1	Wheat	nucleus	59.84	55.3
Zm00001d022524_P001	Maize	nucleus	58.61	55.21
GSMUA_Achr5P27730_001	Banana	nucleus	68.03	53.21
TraesCS4B01G174400.1	Wheat	nucleus	65.16	51.46
TraesCS4D01G176400.1	Wheat	nucleus	64.34	51.31
VIT_08s0056g01200.t01	Wine grape	nucleus	49.18	50.85
TraesCS4A01G130200.1	Wheat	nucleus	63.93	50.81
KXG39473	Sorghum	nucleus	65.16	50.64
GSMUA_Achr6P15910_001	Banana	nucleus	64.75	49.84
GSMUA_Achr10P...	Banana	nucleus	54.1	49.62
Zm00001d047559_P001	Maize	nucleus	63.52	49.21
PGSC0003DMT400069529	Potato	nucleus	48.77	48.57
Zm00001d028986_P001	Maize	nucleus	62.3	47.06
GSMUA_Achr3P09460_001	Banana	nucleus	61.48	46.88
Solyc06g072890.1.1	Tomato	nucleus	50.41	46.59
TraesCS3A01G073500.1	Wheat	nucleus	48.77	45.77
Bra036446.1-P	Field mustard	nucleus	49.18	45.28
TraesCS3D01G073300.1	Wheat	nucleus	48.36	45.21
KRG94925	Soybean	nucleus	51.64	45.0
TraesCS3B01G087800.1	Wheat	nucleus	47.95	44.83
OQU90491	Sorghum	nucleus	47.54	44.62
HORVU3Hr1G013290.3	Barley	nucleus	47.13	44.06
Os03t0325600-01	Rice	nucleus	63.52	43.54
KRH64971	Soybean	nucleus	52.46	43.39
KXG24798	Sorghum	nucleus	48.77	43.12
GSMUA_Achr9P05010_001	Banana	nucleus, plastid	63.93	42.98
Os08t0242400-01	Rice	nucleus	49.59	42.61
CDY21173	Canola	nucleus	50.0	42.21
CDY29949	Canola	nucleus	50.0	42.21
CDY38461	Canola	nucleus	46.72	41.61
AT5G17810.2	Thale cress	nucleus	45.49	41.42
Bra002108.1-P	Field mustard	nucleus	46.31	41.39
HORVU3Hr1G013330.1	Barley	nucleus	32.79	41.24
Bra023638.1-P	Field mustard	nucleus	46.31	41.09
CDY16883	Canola	nucleus	46.31	40.94
CDY02686	Canola	nucleus	46.72	40.28
CDY66087	Canola	nucleus	45.9	40.0
Zm00001d024410_P001	Maize	nucleus	47.13	39.12
AT3G03660.3	Thale cress	nucleus, plastid	51.64	38.65
Bra031980.1-P	Field mustard	nucleus	49.18	37.27
CDY51756	Canola	plastid	49.18	36.81
GSMUA_Achr8P01590_001	Banana	nucleus	63.11	36.67
CDY50656	Canola	nucleus	49.59	35.69
CDY72488	Canola	nucleus, plastid	36.07	35.63
HORVU4Hr1G051530.5	Barley	nucleus	49.59	35.07
GSMUA_Achr8P02040_001	Banana	nucleus	12.7	24.22
GSMUA_Achr7P07430_001	Banana	nucleus	13.93	23.78
GSMUA_Achr9P06660_001	Banana	nucleus	32.38	20.41
GSMUA_Achr7P14860_001	Banana	nucleus	15.16	19.47
GSMUA_Achr4P30610_001	Banana	nucleus	14.34	19.02
GSMUA_Achr4P29470_001	Banana	nucleus	12.7	18.79
GSMUA_Achr2P16080_001	Banana	nucleus	14.75	18.56
GSMUA_Achr9P04090_001	Banana	nucleus	13.93	17.99
GSMUA_Achr7P18230_001	Banana	nucleus	13.93	17.62
GSMUA_Achr5P29220_001	Banana	nucleus	14.34	17.5
GSMUA_Achr8P27170_001	Banana	nucleus	31.97	17.45
GSMUA_Achr8P15620_001	Banana	nucleus, plastid	15.57	16.24
GSMUA_Achr1P17980_001	Banana	nucleus	15.57	16.03
GSMUA_Achr4P25530_001	Banana	nucleus	13.52	15.64
GSMUA_Achr5P11080_001	Banana	nucleus	13.52	15.0
GSMUA_Achr7P04050_001	Banana	nucleus	14.34	14.96
GSMUA_Achr10P...	Banana	nucleus	13.93	14.59
GSMUA_Achr3P14840_001	Banana	nucleus	15.57	13.43
GSMUA_Achr10P...	Banana	nucleus	14.75	13.19
GSMUA_AchrUn_...	Banana	nucleus	15.16	13.03

Protein Annotations

Gene3D:1.10.10.60	MapMan:15.5.3.6	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0005488
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	EnsemblPlantsGene:GSMUA_Achr10G12820_001	EnsemblPlants:GSMUA_Achr10P12820_001
EnsemblPlants:GSMUA_Achr10T12820_001	InterPro:Homeobox-like_sf	InterPro:Homeobox_dom	InterPro:IPR001356	UniProt:M0RHQ8	PFAM:PF00046
PFscan:PS50071	PANTHER:PTHR24326	PANTHER:PTHR24326:SF185	SMART:SM00389	SUPFAM:SSF46689	UniParc:UPI0002953048
SEG:seg	:	:	:	:	:

Description

WUSCHEL-related homeobox 11 [Source:GMGC_GENE;Acc:GSMUA_Achr10G12820_001]

Coordinates

chr10:-:21705144..21706321

Molecular Weight (calculated)

26871.3 Da

IEP (calculated)

8.211

GRAVY (calculated)

-0.434

Length

244 amino acids

Sequence
(BLAST)

001: MDEQRNSPNR SSTAAEAVRS RWTPKPEQIL ILESIFNSGM VNPPKEETVR IRKLLERFGS VGDANVFYWF QNRRSRSRRR QRQLQASGGA VLYEPASSSS
101: SSTSSNNSSG GGSFFPCSSS ASSSFSSLVV HDGGGDDLFS ISRQMGFMGS GQNPYLFSVS KQEHLFDQSN RSQLNSDYNP WTITVFINGI PSEVPRGPID
201: LKATFGQNVT LVHSSGELLP INEYGILLQS LQMGESYFLV SCSI

Best Arabidopsis Sequence Match ( AT3G03660.1 )
(BLAST)

001: MDQEQTPHSP TRHSRSPPSS ASGSTSAEPV RSRWSPKPEQ ILILESIFHS GMVNPPKEET VRIRKMLEKF GAVGDANVFY WFQNRRSRSR RRQRQLQAAA
101: AAADATTNTC DQTMMVSNSL PHHSGSDLGF GGCSTSSNYL FASSSSSYGG GCDNQSNSGM ENLLTMSGQM SYHEATHHHY QNHSSNVTSI LCPSDQNSNF
201: QYQQGAITVF INGVPTEVTR GGIDMKATFG EDLVLVHSSG VPLPTDEFGF LMHSLQHGEA YFLVPRQT

Arabidopsis Description

WOX11WUSCHEL related homeobox 11 [Source:UniProtKB/TrEMBL;Acc:A0A1I9LND8]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.