Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr1P17980_001 | Banana | nucleus | 63.73 | 76.37 |
| GSMUA_Achr7P04050_001 | Banana | nucleus | 61.62 | 74.79 |
| GSMUA_Achr4P29470_001 | Banana | nucleus | 39.79 | 68.48 |
| GSMUA_Achr3P14840_001 | Banana | nucleus | 66.9 | 67.14 |
| KRH60910 | Soybean | nucleus | 43.31 | 59.13 |
| GSMUA_Achr4P25530_001 | Banana | nucleus | 43.66 | 58.77 |
| GSMUA_Achr5P11080_001 | Banana | nucleus | 45.07 | 58.18 |
| CDY41648 | Canola | nucleus | 34.86 | 57.89 |
| VIT_18s0122g01140.t01 | Wine grape | nucleus | 55.63 | 56.63 |
| GSMUA_Achr10P... | Banana | nucleus | 54.23 | 56.41 |
| KRH51590 | Soybean | nucleus | 42.96 | 55.71 |
| VIT_04s0044g00150.t01 | Wine grape | nucleus | 42.96 | 51.05 |
| Solyc02g082670.2.1 | Tomato | nucleus | 48.24 | 50.0 |
| PGSC0003DMT400003980 | Potato | nucleus | 48.24 | 49.82 |
| CDX75511 | Canola | nucleus | 44.37 | 49.22 |
| VIT_04s0044g00160.t01 | Wine grape | nucleus | 40.85 | 49.15 |
| Bra011623.1-P | Field mustard | nucleus | 44.37 | 48.84 |
| Bra010531.1-P | Field mustard | nucleus | 40.14 | 48.31 |
| AT4G35550.1 | Thale cress | nucleus | 45.42 | 48.13 |
| CDX69148 | Canola | nucleus | 44.72 | 47.92 |
| CDY40623 | Canola | nucleus | 44.01 | 47.53 |
| CDX72546 | Canola | nucleus | 43.66 | 47.51 |
| KRH01611 | Soybean | nucleus | 44.37 | 47.37 |
| KRH70496 | Soybean | nucleus | 43.66 | 47.33 |
| CDY24814 | Canola | nucleus | 39.79 | 47.28 |
| Bra017720.1-P | Field mustard | nucleus | 43.31 | 46.42 |
| KRH36192 | Soybean | nucleus | 45.77 | 46.26 |
| KRG90565 | Soybean | nucleus | 44.01 | 44.01 |
| GSMUA_Achr8P02040_001 | Banana | nucleus | 12.32 | 27.34 |
| GSMUA_Achr7P07430_001 | Banana | nucleus | 11.27 | 22.38 |
| GSMUA_Achr4P30610_001 | Banana | nucleus | 13.03 | 20.11 |
| GSMUA_Achr5P29220_001 | Banana | nucleus | 13.73 | 19.5 |
| GSMUA_Achr2P16080_001 | Banana | nucleus | 13.03 | 19.07 |
| GSMUA_Achr9P04090_001 | Banana | nucleus | 12.68 | 19.05 |
| GSMUA_Achr7P18230_001 | Banana | nucleus | 12.68 | 18.65 |
| GSMUA_Achr7P14860_001 | Banana | nucleus | 11.62 | 17.37 |
| GSMUA_Achr10P... | Banana | nucleus | 14.79 | 15.79 |
| GSMUA_Achr10P... | Banana | nucleus | 12.68 | 15.45 |
| GSMUA_Achr10P... | Banana | nucleus | 13.03 | 15.16 |
| GSMUA_Achr3P09460_001 | Banana | nucleus | 15.49 | 13.75 |
| GSMUA_Achr8P15620_001 | Banana | nucleus, plastid | 10.92 | 13.25 |
| GSMUA_Achr5P27730_001 | Banana | nucleus | 14.44 | 13.14 |
| GSMUA_Achr9P06660_001 | Banana | nucleus | 15.85 | 11.63 |
| GSMUA_Achr6P15910_001 | Banana | nucleus | 12.68 | 11.36 |
| GSMUA_Achr9P05010_001 | Banana | nucleus, plastid | 13.73 | 10.74 |
| GSMUA_Achr8P01590_001 | Banana | nucleus | 15.85 | 10.71 |
| GSMUA_Achr8P27170_001 | Banana | nucleus | 16.2 | 10.29 |
| HORVU1Hr1G087940.1 | Barley | cytosol, plasma membrane, plastid | 7.39 | 8.43 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.3.6 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | EnsemblPlantsGene:GSMUA_AchrUn_randomG18610_001 | EnsemblPlants:GSMUA_AchrUn_randomP18610_001 |
| EnsemblPlants:GSMUA_AchrUn_randomT18610_001 | InterPro:Homeobox-like_sf | InterPro:Homeobox_dom | InterPro:IPR001356 | UniProt:M0UAC0 | PFAM:PF00046 |
| PFscan:PS50071 | PANTHER:PTHR24326 | PANTHER:PTHR24326:SF340 | SMART:SM00389 | SUPFAM:SSF46689 | UniParc:UPI0002964B3C |
| SEG:seg | : | : | : | : | : |
Description
WUSCHEL-related homeobox 8 [Source:GMGC_GENE;Acc:GSMUA_AchrUn_randomG18610_001]
Coordinates
chrchrUn_random:-:89162062..89164896
Molecular Weight (calculated)
31449.7 Da
IEP (calculated)
5.555
GRAVY (calculated)
-0.799
Length
284 amino acids
Sequence
(BLAST)
(BLAST)
001: MEWERGPGGG GGGVRNDEEG EGRSGSGGGG DGAGGEGVLY VKVMTDEQME VLRRQIAVYA TICEQLVEMH KAITAHHDSL AGMRLGGLYN DSLMASGGHK
101: ITARQRWTPT SMQLQILETM FNQGNGTPSK QNIKQITTEL SQHGQISESN VYNWFQNRRA RSKRKKMAAL PSNTESEAEA DEESPDEKKP RPDEFHHENL
201: PVSISNHPIY DEQMNAEVHL LASEINQAQG RCRLNESLKS SGGLDHMSYE SVLSTPRLDH LMDKFDMPTS FSPFHSGERY DVMG
101: ITARQRWTPT SMQLQILETM FNQGNGTPSK QNIKQITTEL SQHGQISESN VYNWFQNRRA RSKRKKMAAL PSNTESEAEA DEESPDEKKP RPDEFHHENL
201: PVSISNHPIY DEQMNAEVHL LASEINQAQG RCRLNESLKS SGGLDHMSYE SVLSTPRLDH LMDKFDMPTS FSPFHSGERY DVMG
001: MMEWDNQLQP NNHHSSNLQG IDVNGGSGAG GGMYVKVMTD EQYETLRKQI AIYGTICERL VEMHKTLTAQ QDLAGGRMGG LYADPMMSSL GHKMTARQRW
101: TPTPVQLQIL ERIFDQGTGT PSKQKIKDIT EELSQHGQIA EQNVYNWFQN RRARSKRKQH GGGSSGNNNG ESEVETEVEA LNEKRVVRPE SLLGLPDGNS
201: NNNGLGTTTA TTTAPRPEDL CFQSPEISSD LHLLDVLSNP RDEHLVGKMG LAESYNLYDH VEDYGMSG
101: TPTPVQLQIL ERIFDQGTGT PSKQKIKDIT EELSQHGQIA EQNVYNWFQN RRARSKRKQH GGGSSGNNNG ESEVETEVEA LNEKRVVRPE SLLGLPDGNS
201: NNNGLGTTTA TTTAPRPEDL CFQSPEISSD LHLLDVLSNP RDEHLVGKMG LAESYNLYDH VEDYGMSG
Arabidopsis Description
WOX13WOX13 [Source:UniProtKB/TrEMBL;Acc:A0A178UZQ1]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.