Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400003980 | Potato | nucleus | 97.81 | 97.45 |
| VIT_04s0044g00150.t01 | Wine grape | nucleus | 58.03 | 66.53 |
| VIT_04s0044g00160.t01 | Wine grape | nucleus | 56.93 | 66.1 |
| CDY41648 | Canola | nucleus | 39.78 | 63.74 |
| GSMUA_Achr4P29470_001 | Banana | nucleus | 37.96 | 63.03 |
| GSMUA_Achr1P17980_001 | Banana | nucleus | 50.73 | 58.65 |
| KRH36192 | Soybean | nucleus | 58.39 | 56.94 |
| KRG90565 | Soybean | nucleus | 58.39 | 56.34 |
| Os01t0818400-01 | Rice | nucleus | 54.38 | 55.81 |
| CDX75511 | Canola | nucleus | 51.82 | 55.47 |
| TraesCSU01G204800.1 | Wheat | nucleus | 31.39 | 55.13 |
| CDX69148 | Canola | nucleus | 53.28 | 55.09 |
| Bra011623.1-P | Field mustard | nucleus | 51.82 | 55.04 |
| CDX72546 | Canola | nucleus | 51.82 | 54.41 |
| Bra010531.1-P | Field mustard | nucleus | 46.72 | 54.24 |
| AT4G35550.1 | Thale cress | nucleus | 52.92 | 54.1 |
| CDY40623 | Canola | nucleus | 51.82 | 53.99 |
| TraesCS3B01G373800.1 | Wheat | nucleus | 51.09 | 53.64 |
| Bra017720.1-P | Field mustard | nucleus | 51.46 | 53.21 |
| CDY24814 | Canola | nucleus | 46.35 | 53.14 |
| TraesCS3A01G341700.1 | Wheat | nucleus | 51.09 | 52.83 |
| Zm00001d043076_P001 | Maize | nucleus | 52.19 | 52.38 |
| GSMUA_Achr7P04050_001 | Banana | nucleus | 44.53 | 52.14 |
| EES01660 | Sorghum | nucleus | 52.55 | 51.8 |
| TraesCS3D01G335500.1 | Wheat | nucleus | 49.27 | 51.33 |
| GSMUA_Achr5P11080_001 | Banana | nucleus | 40.88 | 50.91 |
| Zm00001d012516_P001 | Maize | nucleus | 51.09 | 49.65 |
| GSMUA_AchrUn_... | Banana | nucleus | 50.0 | 48.24 |
| GSMUA_Achr3P14840_001 | Banana | nucleus | 48.91 | 47.35 |
| Solyc03g096300.2.1 | Tomato | nucleus | 11.31 | 19.62 |
| Solyc06g072890.1.1 | Tomato | nucleus | 15.69 | 16.29 |
| Solyc11g072770.1.1 | Tomato | mitochondrion, nucleus | 11.68 | 16.24 |
| Solyc04g078650.2.1 | Tomato | nucleus, plastid | 14.23 | 16.12 |
| Solyc11g072790.1.1 | Tomato | nucleus | 11.31 | 14.83 |
| Solyc02g077390.1.1 | Tomato | nucleus | 18.61 | 14.25 |
| HORVU1Hr1G087940.1 | Barley | cytosol, plasma membrane, plastid | 12.77 | 14.06 |
| Solyc06g076000.1.1 | Tomato | nucleus | 12.04 | 13.75 |
| Solyc02g083950.2.1 | Tomato | nucleus | 12.77 | 12.87 |
| Solyc03g118770.2.1 | Tomato | nucleus | 15.69 | 10.94 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.3.6 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | InterPro:Homeobox-like_sf | InterPro:Homeobox_dom |
| InterPro:IPR001356 | UniProt:K4BAD7 | PFAM:PF00046 | PFscan:PS50071 | PANTHER:PTHR24326 | PANTHER:PTHR24326:SF340 |
| SMART:SM00389 | SUPFAM:SSF46689 | EnsemblPlantsGene:Solyc02g082670.2 | EnsemblPlants:Solyc02g082670.2.1 | UniParc:UPI0001ED07EC | SEG:seg |
Description
WUSCHEL-related homeobox 13 [Source:Projected from Arabidopsis thaliana (AT4G35550) UniProtKB/Swiss-Prot;Acc:O81788]
Coordinates
chr2:-:46315115..46318036
Molecular Weight (calculated)
30747.1 Da
IEP (calculated)
5.610
GRAVY (calculated)
-0.858
Length
274 amino acids
Sequence
(BLAST)
(BLAST)
001: MDWEKQQQQP PVSAPQQTAE ELNGTVSGGM FVKVMTDEQM EVLRKQIAVY ATICEQLVDL HKSMASQHDL AGARLGNLYC DPLVTSAGHK ITGRQRWTPT
101: PMQLQILERI FEQGNGTPTK QKIKEITSEL SQHGQISETN VYNWFQNRRA RSKRKQQVAA TNNTESEVET EVESPNEKKT KPEDLQSSHM PTSMAEDLGY
201: ENPDVSSGMH SLDPRTSKPE PMFPSDGSSK PAASYGQMSF YGMSNPRMDQ LMGKMEVPGS YHPYIHADDY NMTG
101: PMQLQILERI FEQGNGTPTK QKIKEITSEL SQHGQISETN VYNWFQNRRA RSKRKQQVAA TNNTESEVET EVESPNEKKT KPEDLQSSHM PTSMAEDLGY
201: ENPDVSSGMH SLDPRTSKPE PMFPSDGSSK PAASYGQMSF YGMSNPRMDQ LMGKMEVPGS YHPYIHADDY NMTG
001: MMEWDNQLQP NNHHSSNLQG IDVNGGSGAG GGMYVKVMTD EQYETLRKQI AIYGTICERL VEMHKTLTAQ QDLAGGRMGG LYADPMMSSL GHKMTARQRW
101: TPTPVQLQIL ERIFDQGTGT PSKQKIKDIT EELSQHGQIA EQNVYNWFQN RRARSKRKQH GGGSSGNNNG ESEVETEVEA LNEKRVVRPE SLLGLPDGNS
201: NNNGLGTTTA TTTAPRPEDL CFQSPEISSD LHLLDVLSNP RDEHLVGKMG LAESYNLYDH VEDYGMSG
101: TPTPVQLQIL ERIFDQGTGT PSKQKIKDIT EELSQHGQIA EQNVYNWFQN RRARSKRKQH GGGSSGNNNG ESEVETEVEA LNEKRVVRPE SLLGLPDGNS
201: NNNGLGTTTA TTTAPRPEDL CFQSPEISSD LHLLDVLSNP RDEHLVGKMG LAESYNLYDH VEDYGMSG
Arabidopsis Description
WOX13WOX13 [Source:UniProtKB/TrEMBL;Acc:A0A178UZQ1]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.