Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3B01G373800.1 | Wheat | nucleus | 91.64 | 92.34 |
| TraesCS3A01G341700.1 | Wheat | nucleus | 92.4 | 91.7 |
| HORVU3Hr1G080660.5 | Barley | nucleus | 92.4 | 90.67 |
| TraesCSU01G204800.1 | Wheat | nucleus | 52.85 | 89.1 |
| Os01t0818400-01 | Rice | nucleus | 76.43 | 75.28 |
| EES01660 | Sorghum | nucleus | 71.86 | 67.99 |
| Zm00001d043076_P001 | Maize | nucleus | 69.96 | 67.4 |
| Zm00001d012516_P001 | Maize | nucleus | 66.92 | 62.41 |
| KRH60910 | Soybean | nucleus | 45.63 | 57.69 |
| VIT_04s0044g00150.t01 | Wine grape | nucleus | 50.95 | 56.07 |
| GSMUA_Achr4P25530_001 | Banana | nucleus | 44.49 | 55.45 |
| VIT_04s0044g00160.t01 | Wine grape | nucleus | 49.05 | 54.66 |
| KRH51590 | Soybean | nucleus | 45.25 | 54.34 |
| CDY01358 | Canola | nucleus | 27.0 | 53.38 |
| Bra012245.1-P | Field mustard | nucleus | 27.0 | 53.38 |
| VIT_18s0122g01140.t01 | Wine grape | nucleus | 55.51 | 52.33 |
| PGSC0003DMT400003980 | Potato | nucleus | 51.71 | 49.45 |
| Solyc02g082670.2.1 | Tomato | nucleus | 51.33 | 49.27 |
| KRH36192 | Soybean | nucleus | 50.57 | 47.33 |
| KRH01611 | Soybean | nucleus | 47.53 | 46.99 |
| KRH70496 | Soybean | nucleus | 46.01 | 46.18 |
| KRG90565 | Soybean | nucleus | 47.91 | 44.37 |
| AT1G20710.1 | Thale cress | nucleus | 31.56 | 42.13 |
| CDX93197 | Canola | nucleus | 30.42 | 41.03 |
| CDY31870 | Canola | nucleus | 30.42 | 41.03 |
| Bra025839.1-P | Field mustard | nucleus | 31.56 | 40.89 |
| CDY29511 | Canola | nucleus | 31.56 | 40.89 |
| CDY65899 | Canola | nucleus | 31.94 | 40.19 |
| AT1G20700.1 | Thale cress | nucleus | 31.18 | 38.86 |
| TraesCS2D01G515600.1 | Wheat | plastid | 14.83 | 16.46 |
| TraesCS3D01G073300.1 | Wheat | nucleus | 15.59 | 15.71 |
| TraesCS2D01G100200.1 | Wheat | nucleus | 14.83 | 14.77 |
| TraesCS3D01G361100.1 | Wheat | nucleus | 11.79 | 14.76 |
| TraesCS5D01G162600.1 | Wheat | nucleus | 12.93 | 14.05 |
| TraesCS1D01G054000.1 | Wheat | nucleus | 13.69 | 13.48 |
| TraesCS4D01G176400.1 | Wheat | nucleus | 15.21 | 13.07 |
| TraesCS3D01G352600.1 | Wheat | nucleus | 14.07 | 12.98 |
| TraesCS3D01G352500.1 | Wheat | nucleus | 14.45 | 12.75 |
| TraesCS5D01G097400.1 | Wheat | nucleus | 15.21 | 12.42 |
| TraesCS3D01G352700.1 | Wheat | nucleus | 13.69 | 12.37 |
| TraesCS1D01G406900.1 | Wheat | nucleus | 14.45 | 7.82 |
| TraesCS3D01G244300.1 | Wheat | nucleus, plastid | 14.83 | 7.6 |
Protein Annotations
| EnsemblPlants:TraesCS3D01G335500.1 | EnsemblPlantsGene:TraesCS3D01G335500 | Gene3D:1.10.10.60 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0005488 | InterPro:Homeobox-like_sf | InterPro:Homeobox_dom | InterPro:IPR001356 | PANTHER:PTHR24326 | PANTHER:PTHR24326:SF340 |
| PFAM:PF00046 | PFscan:PS50071 | SEG:seg | SMART:SM00389 | SUPFAM:SSF46689 | TIGR:cd00086 |
| MapMan:15.5.3.6 | : | : | : | : | : |
Description
No Description!
Coordinates
chr3D:+:447560283..447562999
Molecular Weight (calculated)
29473.5 Da
IEP (calculated)
6.860
GRAVY (calculated)
-0.841
Length
263 amino acids
Sequence
(BLAST)
(BLAST)
001: MEWDKAAAAA AAGGEPAEER GEALGYVKVM TDEQMEVLRK QISIYATICE QLVEMHRALT AHQDSIAGMR LGNLYCDPLM VHGGHKITAR QRWTPTQMQL
101: QILESIFDQG NGTPSKQKIK DITAELSQHG QISETNVYNW FQNRRARSKR KQAASSLPSN TESEAEGDED SPTDKKPRSD GSQQQGMAAR AHNPERISEM
201: HRHFDAAERE QVRGPMYGSS NDNGLRPSGG LGQMSFYENV MSNPSMFSKH HFFSRQCNTP FLQ
101: QILESIFDQG NGTPSKQKIK DITAELSQHG QISETNVYNW FQNRRARSKR KQAASSLPSN TESEAEGDED SPTDKKPRSD GSQQQGMAAR AHNPERISEM
201: HRHFDAAERE QVRGPMYGSS NDNGLRPSGG LGQMSFYENV MSNPSMFSKH HFFSRQCNTP FLQ
001: MMEWDNQLQP NNHHSSNLQG IDVNGGSGAG GGMYVKVMTD EQYETLRKQI AIYGTICERL VEMHKTLTAQ QDLAGGRMGG LYADPMMSSL GHKMTARQRW
101: TPTPVQLQIL ERIFDQGTGT PSKQKIKDIT EELSQHGQIA EQNVYNWFQN RRARSKRKQH GGGSSGNNNG ESEVETEVEA LNEKRVVRPE SLLGLPDGNS
201: NNNGLGTTTA TTTAPRPEDL CFQSPEISSD LHLLDVLSNP RDEHLVGKMG LAESYNLYDH VEDYGMSG
101: TPTPVQLQIL ERIFDQGTGT PSKQKIKDIT EELSQHGQIA EQNVYNWFQN RRARSKRKQH GGGSSGNNNG ESEVETEVEA LNEKRVVRPE SLLGLPDGNS
201: NNNGLGTTTA TTTAPRPEDL CFQSPEISSD LHLLDVLSNP RDEHLVGKMG LAESYNLYDH VEDYGMSG
Arabidopsis Description
WOX13WOX13 [Source:UniProtKB/TrEMBL;Acc:A0A178UZQ1]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.