Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 2
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1B01G069000.1 | Wheat | nucleus, plastid | 94.76 | 95.83 |
| TraesCS1A01G052000.1 | Wheat | nucleus, plastid | 94.38 | 95.82 |
| HORVU1Hr1G010580.2 | Barley | nucleus, plastid | 86.89 | 82.56 |
| VIT_06s0004g03780.t01 | Wine grape | nucleus | 28.84 | 58.33 |
| Zm00001d035535_P001 | Maize | nucleus | 56.18 | 58.14 |
| OQU77281 | Sorghum | mitochondrion, nucleus | 58.43 | 57.35 |
| Zm00001d010998_P001 | Maize | nucleus | 46.44 | 56.36 |
| Os05t0118700-00 | Rice | nucleus | 55.81 | 52.1 |
| PGSC0003DMT400016896 | Potato | mitochondrion | 20.97 | 50.91 |
| GSMUA_Achr5P29220_001 | Banana | nucleus | 31.84 | 42.5 |
| TraesCS5D01G162600.1 | Wheat | nucleus | 34.83 | 38.43 |
| KRG99904 | Soybean | nucleus | 29.59 | 37.62 |
| KRH49082 | Soybean | nucleus | 28.84 | 36.67 |
| CDX77191 | Canola | nucleus | 31.84 | 36.02 |
| CDY31716 | Canola | nucleus | 31.46 | 35.9 |
| Bra035688.1-P | Field mustard | nucleus | 31.46 | 35.9 |
| Solyc11g072770.1.1 | Tomato | mitochondrion, nucleus | 26.22 | 35.53 |
| Solyc11g072790.1.1 | Tomato | nucleus | 27.72 | 35.41 |
| CDX95764 | Canola | nucleus | 29.21 | 35.14 |
| PGSC0003DMT400065247 | Potato | mitochondrion | 26.22 | 35.0 |
| CDX83299 | Canola | nucleus | 29.21 | 34.51 |
| Bra000484.1-P | Field mustard | nucleus | 29.21 | 34.51 |
| AT2G28610.1 | Thale cress | nucleus | 31.09 | 34.02 |
| TraesCS3D01G361100.1 | Wheat | nucleus | 19.1 | 24.29 |
| TraesCS2D01G515600.1 | Wheat | plastid | 20.22 | 22.78 |
| TraesCS5D01G097400.1 | Wheat | nucleus | 22.1 | 18.32 |
| TraesCS3D01G352500.1 | Wheat | nucleus | 20.22 | 18.12 |
| TraesCS3D01G352600.1 | Wheat | nucleus | 18.73 | 17.54 |
| TraesCS3D01G352700.1 | Wheat | nucleus | 17.98 | 16.49 |
| TraesCS3D01G335500.1 | Wheat | nucleus | 13.48 | 13.69 |
| TraesCS4D01G176400.1 | Wheat | nucleus | 14.98 | 13.07 |
| TraesCS3D01G073300.1 | Wheat | nucleus | 12.73 | 13.03 |
| TraesCS2D01G100200.1 | Wheat | nucleus | 12.36 | 12.5 |
| TraesCS3D01G244300.1 | Wheat | nucleus, plastid | 16.1 | 8.38 |
| TraesCS1D01G406900.1 | Wheat | nucleus | 14.23 | 7.82 |
Protein Annotations
| EnsemblPlants:TraesCS1D01G054000.1 | EnsemblPlantsGene:TraesCS1D01G054000 | Gene3D:1.10.10.60 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0005488 | InterPro:Homeobox-like_sf | InterPro:Homeobox_dom | InterPro:IPR001356 | PANTHER:PTHR24326 | PANTHER:PTHR24326:SF115 |
| PFAM:PF00046 | PFscan:PS50071 | SEG:seg | SMART:SM00389 | SUPFAM:SSF46689 | TIGR:cd00086 |
| MapMan:15.5.3.6 | : | : | : | : | : |
Description
No Description!
Coordinates
chr1D:-:35059358..35061092
Molecular Weight (calculated)
29148.3 Da
IEP (calculated)
8.467
GRAVY (calculated)
-0.449
Length
267 amino acids
Sequence
(BLAST)
(BLAST)
001: MAATATATAA ATSVVTGTTR WCPTPEQLMI LEEMYRGGLR TPNASQIQQI TAHLAHYGRI EGKNVFYWFQ NHKARDRQKL RRRLCMSHHL LSCAHYYAAA
101: NAGQYHHQQQ LLGAGAVPPP LLQHQQQQQQ YYSASCAGGG YDQHLLPTTV PASAYATAAG YAYPFAAVPA SRCADPSPPK TPLSFHHQGG GIVGSPEYSL
201: GRLGNFGVVD DTCRPSRYEQ QQQQQQLTAA TEDQAAPVTA TTGLFCRPLK TLDLFPGAIK EEHRDVA
101: NAGQYHHQQQ LLGAGAVPPP LLQHQQQQQQ YYSASCAGGG YDQHLLPTTV PASAYATAAG YAYPFAAVPA SRCADPSPPK TPLSFHHQGG GIVGSPEYSL
201: GRLGNFGVVD DTCRPSRYEQ QQQQQQLTAA TEDQAAPVTA TTGLFCRPLK TLDLFPGAIK EEHRDVA
001: MSPVASTRWC PTPEQLMILE EMYRSGIRTP NAVQIQQITA HLAFYGRIEG KNVFYWFQNH KARDRQKLRK KLAKQLHQQQ HQLQLQLQQI KPKPISSMIS
101: QPVNKNIIDH HNPYHHHHHN HHHNHHRPYD HMSFDCCSHP SPMCLPHQGT GVGEAPSKVM NEYYCTKSGA EEILMQKSIT GPNSSYGRDW MMMMDMGPRP
201: SYPSSSSSPI SCCNMMMSSP KIPLKTLELF PISSINSKQD STKL
101: QPVNKNIIDH HNPYHHHHHN HHHNHHRPYD HMSFDCCSHP SPMCLPHQGT GVGEAPSKVM NEYYCTKSGA EEILMQKSIT GPNSSYGRDW MMMMDMGPRP
201: SYPSSSSSPI SCCNMMMSSP KIPLKTLELF PISSINSKQD STKL
Arabidopsis Description
WOX3Homeobox-leucine zipper transcription factor [Source:UniProtKB/TrEMBL;Acc:Q1PEZ2]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.