Factsheet for Os05t0118700-00

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus, plastid
BaCelLo:	nucleus
iPSORT:	plastid
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os01t0840300-00	Rice	cytosol, mitochondrion, nucleus	15.38	67.69
Zm00001d010998_P001	Maize	nucleus	49.3	64.09
Zm00001d035535_P001	Maize	nucleus	56.99	63.18
OQU77281	Sorghum	mitochondrion, nucleus	59.44	62.5
VIT_06s0004g03780.t01	Wine grape	nucleus	27.97	60.61
TraesCS1A01G052000.1	Wheat	nucleus, plastid	52.45	57.03
TraesCS1B01G069000.1	Wheat	nucleus, plastid	52.1	56.44
TraesCS1D01G054000.1	Wheat	nucleus	52.1	55.81
HORVU1Hr1G010580.2	Barley	nucleus, plastid	51.4	52.31
PGSC0003DMT400016896	Potato	mitochondrion	18.53	48.18
Os05t0564500-00	Rice	mitochondrion, nucleus, peroxisome	9.44	41.54
Os07t0533201-00	Rice	mitochondrion, nucleus, peroxisome	9.09	40.0
Os12t0101600-01	Rice	nucleus	31.82	38.89
Os11t0102100-01	Rice	nucleus	31.82	38.89
GSMUA_Achr5P29220_001	Banana	nucleus	26.57	38.0
KRG99904	Soybean	nucleus	27.62	37.62
Solyc11g072790.1.1	Tomato	nucleus	26.92	36.84
KRH49082	Soybean	nucleus	26.57	36.19
Solyc11g072770.1.1	Tomato	mitochondrion, nucleus	24.83	36.04
PGSC0003DMT400065247	Potato	mitochondrion	24.83	35.5
CDX77191	Canola	nucleus	28.67	34.75
CDX95764	Canola	nucleus	26.92	34.68
Bra035688.1-P	Field mustard	nucleus	28.32	34.62
CDY31716	Canola	nucleus	28.32	34.62
Bra000484.1-P	Field mustard	nucleus	27.27	34.51
CDX83299	Canola	nucleus	27.27	34.51
AT2G28610.1	Thale cress	nucleus	28.32	33.2
Os01t0854500-01	Rice	nucleus	18.18	26.0
Os04t0649400-01	Rice	plastid	19.58	23.73
Os04t0663600-01	Rice	nucleus	22.38	22.15
Os01t0818400-01	Rice	nucleus	13.29	14.23
Os08t0242400-01	Rice	nucleus	12.94	13.03
Os07t0684900-01	Rice	nucleus	11.89	12.98
Os03t0325600-01	Rice	nucleus	12.94	10.39
Os01t0667400-02	Rice	plastid	15.04	8.07

Protein Annotations

Gene3D:1.10.10.60	EntrezGene:107275686	MapMan:15.5.3.6	ProteinID:AAV44211.1	ProteinID:BAA90492.1	ProteinID:BAS91992.1
ProteinID:EAZ32679.1	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0005488	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355
GO:GO:0007275	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	InterPro:Homeobox-like_sf
InterPro:Homeobox_dom	InterPro:IPR001356	EnsemblPlantsGene:Os05g0118700	EnsemblPlants:Os05t0118700-00	PFAM:PF00046	PFscan:PS50071
PANTHER:PTHR24326	PANTHER:PTHR24326:SF115	UniProt:Q5W7C3	SMART:SM00389	SUPFAM:SSF46689	UniParc:UPI000045486B
RefSeq:XP_015639083.1	SEG:seg	:	:	:	:

Description

GLABROUS LEAF AND HULL 1Similar to WUSCHEL-related homeobox 3B. (Os05t0118700-00)

Coordinates

chr5:+:977812..978752

Molecular Weight (calculated)

29895.3 Da

IEP (calculated)

8.233

GRAVY (calculated)

-0.161

Length

286 amino acids

Sequence
(BLAST)

001: MAPAVQQQQS GGGGGSTGAA AVGSTTRWCP TPEQLMMLEE MYRGGLRTPN AAQIQQITAH LSTYGRIEGK NVFYWFQNHK ARDRQKLRRR LCISHHLLSC
101: AHYYHHHLAA AAAVVPPPQL LPPLHPSSSS SSCGGGLIDH ANSLLSPTSA TTPTSAAAAA AAAAYTTSYY YPFTAAAAPP PPRTSPAASP LFHYNQGGGG
201: VVLPAAEAIG RSSSSSDYSL GKLVDNFGVA LEETFPAQPQ QPATTMAMTA VVDTTAVAAA AGGFCRPLKT LDLFPGGLKE EQHDVV

Best Arabidopsis Sequence Match ( AT2G28610.1 )
(BLAST)

001: MSPVASTRWC PTPEQLMILE EMYRSGIRTP NAVQIQQITA HLAFYGRIEG KNVFYWFQNH KARDRQKLRK KLAKQLHQQQ HQLQLQLQQI KPKPISSMIS
101: QPVNKNIIDH HNPYHHHHHN HHHNHHRPYD HMSFDCCSHP SPMCLPHQGT GVGEAPSKVM NEYYCTKSGA EEILMQKSIT GPNSSYGRDW MMMMDMGPRP
201: SYPSSSSSPI SCCNMMMSSP KIPLKTLELF PISSINSKQD STKL

Arabidopsis Description

WOX3Homeobox-leucine zipper transcription factor [Source:UniProtKB/TrEMBL;Acc:Q1PEZ2]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.