Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| OQU87881 | Sorghum | nucleus | 89.5 | 82.11 |
| Zm00001d042821_P001 | Maize | nucleus | 90.0 | 81.45 |
| TraesCS3D01G361100.1 | Wheat | nucleus | 84.5 | 80.48 |
| TraesCS3B01G399800.1 | Wheat | nucleus | 84.0 | 80.38 |
| TraesCS3A01G368100.1 | Wheat | nucleus | 83.5 | 78.77 |
| HORVU3Hr1G085050.3 | Barley | nucleus | 81.5 | 77.62 |
| Zm00001d012330_P001 | Maize | nucleus | 84.5 | 71.91 |
| Os01t0840300-00 | Rice | cytosol, mitochondrion, nucleus | 19.0 | 58.46 |
| GSMUA_Achr7P14860_001 | Banana | nucleus | 50.0 | 52.63 |
| PGSC0003DMT400053435 | Potato | nucleus | 40.5 | 51.59 |
| Solyc03g096300.2.1 | Tomato | nucleus | 39.5 | 50.0 |
| AT5G05770.1 | Thale cress | nucleus | 30.0 | 49.18 |
| VIT_13s0019g03460.t01 | Wine grape | nucleus | 34.5 | 48.94 |
| Bra028749.1-P | Field mustard | nucleus | 42.5 | 48.85 |
| KRH73152 | Soybean | nucleus | 43.0 | 48.59 |
| AT3G11260.1 | Thale cress | nucleus | 44.0 | 48.35 |
| KRG97769 | Soybean | nucleus | 41.5 | 47.7 |
| KRH31116 | Soybean | nucleus | 42.5 | 47.22 |
| CDY01007 | Canola | nucleus | 44.0 | 46.07 |
| CDY08539 | Canola | nucleus | 43.5 | 45.55 |
| CDY04966 | Canola | nucleus | 43.0 | 45.03 |
| Bra034855.1-P | Field mustard | mitochondrion | 32.0 | 44.76 |
| CDY14103 | Canola | nucleus | 42.5 | 44.5 |
| CDX98862 | Canola | nucleus | 41.5 | 43.23 |
| Bra009132.1-P | Field mustard | nucleus | 40.5 | 42.19 |
| CDX70130 | Canola | nucleus | 40.5 | 42.19 |
| Os05t0564500-00 | Rice | mitochondrion, nucleus, peroxisome | 13.5 | 41.54 |
| Os07t0533201-00 | Rice | mitochondrion, nucleus, peroxisome | 13.0 | 40.0 |
| Os12t0101600-01 | Rice | nucleus | 27.0 | 23.08 |
| Os11t0102100-01 | Rice | nucleus | 27.0 | 23.08 |
| Os04t0649400-01 | Rice | plastid | 25.5 | 21.61 |
| Os04t0663600-01 | Rice | nucleus | 26.5 | 18.34 |
| Os05t0118700-00 | Rice | nucleus | 26.0 | 18.18 |
| Os07t0684900-01 | Rice | nucleus | 18.0 | 13.74 |
| Os01t0818400-01 | Rice | nucleus | 16.0 | 11.98 |
| Os08t0242400-01 | Rice | nucleus | 16.5 | 11.62 |
| Os03t0325600-01 | Rice | nucleus | 17.5 | 9.83 |
| Os01t0667400-02 | Rice | plastid | 17.5 | 6.57 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.3.6 | EntrezGene:4324824 | EMBL:AK102203 | EMBL:AM234751 | ProteinID:BAB84412.1 |
| ProteinID:BAD82456.1 | ProteinID:BAF06751.1 | ProteinID:BAS75279.1 | ProteinID:EEE55690.1 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0007275 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009987 | InterPro:Homeobox-like_sf | InterPro:Homeobox_dom | InterPro:IPR001356 | EnsemblPlantsGene:Os01g0854500 |
| EnsemblPlants:Os01t0854500-01 | PFAM:PF00046 | PFscan:PS50071 | PANTHER:PTHR24326 | PANTHER:PTHR24326:SF149 | UniProt:Q8W0F1 |
| SMART:SM00389 | SUPFAM:SSF46689 | UniParc:UPI000009F1F8 | RefSeq:XP_015642985.1 | SEG:seg | : |
Description
QUIESCENT-CENTER-SPECIFIC-HOMEOBOX (QHB) GENEHomeobox domain containing protein. (Os01t0854500-01)
Coordinates
chr1:-:36813736..36815023
Molecular Weight (calculated)
22821.9 Da
IEP (calculated)
8.345
GRAVY (calculated)
-0.768
Length
200 amino acids
Sequence
(BLAST)
(BLAST)
001: MEALSGRVGV KCGRWNPTAE QVKVLTELFR AGLRTPSTEQ IQRISTHLSA FGKVESKNVF YWFQNHKARE RHHHKKRRRG ASSPDSGSND DDGRAAAHEG
101: DADLVLQPPE SKREARSYGH HHRLMTCYVR DVVETEAMWE RPTREVETLE LFPLKSYDLE VDKVRYVRGG GGEQCREISF FDVAAGRDPP LELRLCSFGL
101: DADLVLQPPE SKREARSYGH HHRLMTCYVR DVVETEAMWE RPTREVETLE LFPLKSYDLE VDKVRYVRGG GGEQCREISF FDVAAGRDPP LELRLCSFGL
001: MSFSVKGRSL RGNNNGGTGT KCGRWNPTVE QLKILTDLFR AGLRTPTTDQ IQKISTELSF YGKIESKNVF YWFQNHKARE RQKRRKISID FDHHHHQPST
101: RDVFEISEED CQEEEKVIET LQLFPVNSFE DSNSKVDKMR ARGNNQYREY IRETTTTSFS PYSSCGAEME HPPPLDLRLS FL
101: RDVFEISEED CQEEEKVIET LQLFPVNSFE DSNSKVDKMR ARGNNQYREY IRETTTTSFS PYSSCGAEME HPPPLDLRLS FL
Arabidopsis Description
WOX5WUSCHEL-related homeobox 5 [Source:UniProtKB/Swiss-Prot;Acc:Q8H1D2]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.