Factsheet for Bra009132.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX70130	Canola	nucleus	98.96	98.96
Bra028749.1-P	Field mustard	nucleus	80.21	88.51
AT5G05770.1	Thale cress	nucleus	53.65	84.43
Bra034855.1-P	Field mustard	mitochondrion	51.56	69.23
Solyc03g096300.2.1	Tomato	nucleus	50.0	60.76
PGSC0003DMT400053435	Potato	nucleus	48.96	59.87
KRH73152	Soybean	nucleus	53.65	58.19
VIT_13s0019g03460.t01	Wine grape	nucleus	40.1	54.61
KRG97769	Soybean	nucleus	49.48	54.6
KRH31116	Soybean	nucleus	50.0	53.33
GSMUA_Achr7P14860_001	Banana	nucleus	43.23	43.68
Os01t0854500-01	Rice	nucleus	42.19	40.5
OQU87881	Sorghum	nucleus	43.23	38.07
TraesCS3B01G399800.1	Wheat	nucleus	40.62	37.32
HORVU3Hr1G085050.3	Barley	nucleus	40.62	37.14
TraesCS3D01G361100.1	Wheat	nucleus	40.62	37.14
Zm00001d042821_P001	Maize	nucleus	42.71	37.1
TraesCS3A01G368100.1	Wheat	nucleus	40.62	36.79
Zm00001d012330_P001	Maize	nucleus	42.19	34.47
Bra032212.1-P	Field mustard	nucleus	26.56	20.32
Bra000484.1-P	Field mustard	nucleus	23.44	19.91
Bra012245.1-P	Field mustard	nucleus	13.54	19.55
Bra014055.1-P	Field mustard	nucleus	26.04	19.46
Bra026791.1-P	Field mustard	nucleus	26.04	19.3
Bra035688.1-P	Field mustard	nucleus	23.44	19.23
Bra039894.1-P	Field mustard	nucleus	29.69	18.87
Bra024485.1-P	Field mustard	nucleus	28.65	18.71
Bra017448.1-P	Field mustard	nucleus	26.04	18.12
Bra037245.1-P	Field mustard	nucleus	29.17	18.01
Bra002576.1-P	Field mustard	nucleus	19.27	17.62
Bra001694.1-P	Field mustard	nucleus	30.73	16.71
Bra020321.1-P	Field mustard	nucleus	17.19	16.58
Bra022267.1-P	Field mustard	nucleus	29.69	16.24
Bra025839.1-P	Field mustard	nucleus	14.58	13.79
Bra010531.1-P	Field mustard	nucleus	15.1	12.29
Bra017720.1-P	Field mustard	nucleus	16.67	12.08
Bra011623.1-P	Field mustard	nucleus	16.15	12.02
Bra022008.1-P	Field mustard	nucleus	19.27	12.01
Bra023638.1-P	Field mustard	nucleus	15.1	10.55
Bra002108.1-P	Field mustard	nucleus	14.58	10.26
Bra036446.1-P	Field mustard	nucleus	14.06	10.19
Bra005464.1-P	Field mustard	nucleus	19.27	9.49
Bra022960.1-P	Field mustard	nucleus	18.75	9.16
Bra031980.1-P	Field mustard	nucleus	15.1	9.01

Protein Annotations

Gene3D:1.10.10.60	MapMan:15.5.3.6	EnsemblPlantsGene:Bra009132	EnsemblPlants:Bra009132.1	EnsemblPlants:Bra009132.1-P	GO:GO:0003674
GO:GO:0003676	GO:GO:0003677	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	InterPro:Homeobox-like_sf	InterPro:Homeobox_dom	InterPro:IPR001356	UniProt:M4CY35	PFAM:PF00046
PFscan:PS50071	PANTHER:PTHR24326	PANTHER:PTHR24326:SF149	SMART:SM00389	SUPFAM:SSF46689	UniParc:UPI0002544C54
SEG:seg	:	:	:	:	:

Description

AT3G11260 (E=4e-058) WOX5 | WOX5 (WUSCHEL RELATED HOMEOBOX 5); transcription factor

Coordinates

chrA10:+:15365615..15366291

Molecular Weight (calculated)

22075.0 Da

IEP (calculated)

9.182

GRAVY (calculated)

-0.816

Length

192 amino acids

Sequence
(BLAST)

001: MTSGEFSIKA RGLGDNNNGG GGTGTKCGRW NPTVEQVKLL TDLFKAGLRT PSTDQIQKIS MELSFYGKIE SKNVFYWFQN HKARERQKRR KISTVDFDHR
101: QETNLSIPHR HNIRHHQPPP KDTFEACEKE EKVIETLQLF PLSNVERART NITATSHNEY IREHVNTTVF STYSSCGAEM EHPPLDLRLS FL

Best Arabidopsis Sequence Match ( AT3G11260.1 )
(BLAST)

001: MSFSVKGRSL RGNNNGGTGT KCGRWNPTVE QLKILTDLFR AGLRTPTTDQ IQKISTELSF YGKIESKNVF YWFQNHKARE RQKRRKISID FDHHHHQPST
101: RDVFEISEED CQEEEKVIET LQLFPVNSFE DSNSKVDKMR ARGNNQYREY IRETTTTSFS PYSSCGAEME HPPPLDLRLS FL

Arabidopsis Description

WOX5WUSCHEL-related homeobox 5 [Source:UniProtKB/Swiss-Prot;Acc:Q8H1D2]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.