Factsheet for Bra034855.1-P

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

nucleus 2
mitochondrion 4
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY01007	Canola	nucleus	97.9	73.3
CDY08539	Canola	nucleus	97.2	72.77
AT3G11260.1	Thale cress	nucleus	83.92	65.93
Bra028749.1-P	Field mustard	nucleus	66.43	54.6
Bra009132.1-P	Field mustard	nucleus	69.23	51.56
PGSC0003DMT400053435	Potato	nucleus	54.55	49.68
Solyc03g096300.2.1	Tomato	nucleus	54.55	49.37
KRH73152	Soybean	nucleus	56.64	45.76
KRG97769	Soybean	nucleus	55.24	45.4
KRH31116	Soybean	nucleus	54.55	43.33
VIT_13s0019g03460.t01	Wine grape	nucleus	38.46	39.01
GSMUA_Achr7P14860_001	Banana	nucleus	43.36	32.63
Os01t0854500-01	Rice	nucleus	44.76	32.0
OQU87881	Sorghum	nucleus	45.45	29.82
Zm00001d042821_P001	Maize	nucleus	45.45	29.41
TraesCS3B01G399800.1	Wheat	nucleus	41.96	28.71
HORVU3Hr1G085050.3	Barley	nucleus	41.96	28.57
TraesCS3D01G361100.1	Wheat	nucleus	41.96	28.57
TraesCS3A01G368100.1	Wheat	nucleus	41.96	28.3
Zm00001d012330_P001	Maize	nucleus	44.76	27.23
Bra002576.1-P	Field mustard	nucleus	23.08	15.71
Bra020321.1-P	Field mustard	nucleus	20.98	15.08
Bra000484.1-P	Field mustard	nucleus	20.28	12.83
Bra012245.1-P	Field mustard	nucleus	11.89	12.78
Bra026791.1-P	Field mustard	nucleus	23.08	12.74
Bra024485.1-P	Field mustard	nucleus	25.87	12.59
Bra039894.1-P	Field mustard	nucleus	26.57	12.58
Bra035688.1-P	Field mustard	nucleus	20.28	12.39
Bra032212.1-P	Field mustard	nucleus	20.98	11.95
Bra037245.1-P	Field mustard	nucleus	25.87	11.9
Bra017448.1-P	Field mustard	nucleus	22.38	11.59
Bra014055.1-P	Field mustard	nucleus	19.58	10.89
Bra025839.1-P	Field mustard	nucleus	14.69	10.34
Bra001694.1-P	Field mustard	nucleus	24.48	9.92
Bra022267.1-P	Field mustard	nucleus	23.78	9.69
Bra011623.1-P	Field mustard	nucleus	15.38	8.53
Bra010531.1-P	Field mustard	nucleus	13.99	8.47
Bra017720.1-P	Field mustard	nucleus	15.38	8.3
Bra022008.1-P	Field mustard	nucleus	17.48	8.12
Bra005464.1-P	Field mustard	nucleus	19.58	7.18
Bra022960.1-P	Field mustard	nucleus	19.58	7.12
Bra023638.1-P	Field mustard	nucleus	13.29	6.91
Bra036446.1-P	Field mustard	nucleus	12.59	6.79
Bra002108.1-P	Field mustard	nucleus	12.59	6.59
Bra031980.1-P	Field mustard	nucleus	13.29	5.9

Protein Annotations

MapMan:15.5.3.6	EnsemblPlantsGene:Bra034855	EnsemblPlants:Bra034855.1	EnsemblPlants:Bra034855.1-P	GO:GO:0003674	GO:GO:0003676
GO:GO:0003677	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0007275	GO:GO:0008150	GO:GO:0009653	GO:GO:0009719	GO:GO:0009733	GO:GO:0010078
GO:GO:0043565	GO:GO:1902459	InterPro:Homeobox_dom	InterPro:IPR001356	UniProt:M4F1A9	PFAM:PF00046
PANTHER:PTHR24326	PANTHER:PTHR24326:SF149	UniParc:UPI0002547743	SEG:seg	:	:

Description

AT3G11260 (E=1e-022) WOX5 | WOX5 (WUSCHEL RELATED HOMEOBOX 5); transcription factor

Coordinates

chrA05:-:21739139..21739886

Molecular Weight (calculated)

16332.3 Da

IEP (calculated)

5.976

GRAVY (calculated)

-0.645

Length

143 amino acids

Sequence
(BLAST)

001: MSFPLKVRSV RGNNGGGGGT GTKCGRWNPT VEQLKVLTDL FRAGLRTPTT DQIQKISTEL SFYGKIENVF EINEDEEERV IETLQLFPVN SFQESKVEKM
101: RSRVNNQYRE YIRETNTTTF PSYSSCGAEM EHPSPLELRL SFL

Best Arabidopsis Sequence Match ( AT3G11260.1 )
(BLAST)

001: MSFSVKGRSL RGNNNGGTGT KCGRWNPTVE QLKILTDLFR AGLRTPTTDQ IQKISTELSF YGKIESKNVF YWFQNHKARE RQKRRKISID FDHHHHQPST
101: RDVFEISEED CQEEEKVIET LQLFPVNSFE DSNSKVDKMR ARGNNQYREY IRETTTTSFS PYSSCGAEME HPPPLDLRLS FL

Arabidopsis Description

WOX5WUSCHEL-related homeobox 5 [Source:UniProtKB/Swiss-Prot;Acc:Q8H1D2]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.