Factsheet for Bra002576.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY33030	Canola	nucleus	96.19	96.19
CDX80277	Canola	nucleus	96.19	96.19
Bra020321.1-P	Field mustard	nucleus	72.86	76.88
AT5G59340.1	Thale cress	nucleus	71.43	57.69
KRH23053	Soybean	nucleus	30.48	30.19
Solyc06g076000.1.1	Tomato	nucleus	33.81	29.58
PGSC0003DMT400077947	Potato	nucleus	32.86	29.24
KRH10279	Soybean	nucleus	28.1	26.94
KRH29810	Soybean	nucleus	31.43	25.29
GSMUA_Achr10P...	Banana	nucleus	25.71	23.18
Bra034855.1-P	Field mustard	mitochondrion	15.71	23.08
Bra028749.1-P	Field mustard	nucleus	18.57	22.41
KRH24809	Soybean	nucleus	33.81	21.71
Bra009132.1-P	Field mustard	nucleus	17.62	19.27
Bra000484.1-P	Field mustard	nucleus	20.48	19.03
Bra035688.1-P	Field mustard	nucleus	18.57	16.67
Bra017448.1-P	Field mustard	nucleus	20.0	15.22
Bra014055.1-P	Field mustard	nucleus	18.1	14.79
Bra032212.1-P	Field mustard	nucleus	17.62	14.74
Bra022267.1-P	Field mustard	nucleus	21.43	12.82
Bra012245.1-P	Field mustard	nucleus	8.1	12.78
Bra001694.1-P	Field mustard	nucleus	21.43	12.75
Bra024485.1-P	Field mustard	nucleus	17.62	12.59
Bra026791.1-P	Field mustard	nucleus	15.24	12.36
Bra039894.1-P	Field mustard	nucleus	17.62	12.25
Bra037245.1-P	Field mustard	nucleus	17.14	11.58
Bra025839.1-P	Field mustard	nucleus	9.52	9.85
Bra010531.1-P	Field mustard	nucleus	10.95	9.75
Bra022008.1-P	Field mustard	nucleus	14.29	9.74
Bra017720.1-P	Field mustard	nucleus	11.9	9.43
Bra011623.1-P	Field mustard	nucleus	11.43	9.3
Bra036446.1-P	Field mustard	nucleus	11.43	9.06
Bra002108.1-P	Field mustard	nucleus	11.43	8.79
Bra023638.1-P	Field mustard	nucleus	10.48	8.0
Bra031980.1-P	Field mustard	nucleus	11.43	7.45
Bra022960.1-P	Field mustard	nucleus	13.33	7.12
Bra005464.1-P	Field mustard	nucleus	12.38	6.67

Protein Annotations

EnsemblPlants:Bra002576.1	EnsemblPlants:Bra002576.1-P	EnsemblPlantsGene:Bra002576	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	InterPro:Homeobox_dom
InterPro:IPR001356	PANTHER:PTHR24326	PANTHER:PTHR24326:SF203	PFAM:PF00046	SEG:seg	UniParc:UPI0002543B14
UniProt:M4CEE5	MapMan:15.5.3.6	:	:	:	:

Description

AT5G59340 (E=1e-040) WOX2 | WOX2 (WUSCHEL RELATED HOMEOBOX 2); transcription factor

Coordinates

chrA10:-:8788467..8790042

Molecular Weight (calculated)

23279.9 Da

IEP (calculated)

8.670

GRAVY (calculated)

-0.786

Length

210 amino acids

Sequence
(BLAST)

001: MENEGSAGTG SSPRWNPTKE QITLLENLYK QGIRTPRADQ IQQITGRLRA HGHIEVGCVN PYYLHQVRDH HNQHGSVYRQ DLHSNKVMLP SGGYEKRTTT
101: DHKKHDSDIT TTTARMSMSS SSFRFDRFAL GNHGYFSEGI NVNTNGLKTL PLFPLQPLDA ANYSGVGNSS FSLRHDSPVT YCGDDGGRGQ PFIDFFSSGS
201: SRFNNSGNGL

Best Arabidopsis Sequence Match ( AT5G59340.1 )
(BLAST)

001: MENEVNAGTA SSSRWNPTKD QITLLENLYK EGIRTPSADQ IQQITGRLRA YGHIEGKNVF YWFQNHKARQ RQKQKQERMA YFNRLLHKTS RFFYPPPCSN
101: VGCVSPYYLQ QASDHHMNQH GSVYTNDLLH RNNVMIPSGG YEKRTVTQHQ KQLSDIRTTA ATRMPISPSS LRFDRFALRD NCYAGEDINV NSSGRKTLPL
201: FPLQPLNASN ADGMGSSSFA LGSDSPVDCS SDGAGREQPF IDFFSGGSTS TRFDSNGNGL

Arabidopsis Description

WOX2WUSCHEL-related homeobox 2 [Source:UniProtKB/Swiss-Prot;Acc:Q6X7K1]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.