Factsheet for GSMUA_Achr10P26570_001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
cytosol 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	plastid
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH10279	Soybean	nucleus	36.91	39.27
KRH23053	Soybean	nucleus	35.62	39.15
KRH29810	Soybean	nucleus	42.92	38.31
PGSC0003DMT400077947	Potato	nucleus	37.34	36.86
GSMUA_Achr8P02040_001	Banana	nucleus	20.17	36.72
Solyc06g076000.1.1	Tomato	nucleus	37.77	36.67
GSMUA_Achr7P07430_001	Banana	nucleus	20.6	33.57
AT5G59340.1	Thale cress	nucleus	36.48	32.69
KRH24809	Soybean	nucleus	42.92	30.58
GSMUA_Achr4P30610_001	Banana	nucleus	23.18	29.35
CDY32648	Canola	nucleus	21.89	29.14
GSMUA_Achr7P18230_001	Banana	nucleus	24.03	29.02
GSMUA_Achr9P04090_001	Banana	nucleus	23.18	28.57
GSMUA_Achr2P16080_001	Banana	nucleus	22.75	27.32
CDX80277	Canola	nucleus	23.61	26.19
GSMUA_Achr5P29220_001	Banana	nucleus	22.32	26.0
GSMUA_Achr7P14860_001	Banana	nucleus	21.03	25.79
Bra002576.1-P	Field mustard	nucleus	23.18	25.71
CDY33030	Canola	nucleus	23.18	25.71
Bra020321.1-P	Field mustard	nucleus	21.89	25.63
CDY02885	Canola	nucleus	21.89	25.63
GSMUA_Achr8P15620_001	Banana	nucleus, plastid	23.61	23.5
GSMUA_Achr4P29470_001	Banana	nucleus	12.45	17.58
GSMUA_Achr1P17980_001	Banana	nucleus	14.59	14.35
GSMUA_Achr4P25530_001	Banana	nucleus	12.88	14.22
GSMUA_Achr7P04050_001	Banana	nucleus	14.16	14.1
GSMUA_Achr5P11080_001	Banana	nucleus	13.3	14.09
GSMUA_Achr10P...	Banana	nucleus	14.59	13.93
GSMUA_Achr10P...	Banana	nucleus	15.02	12.82
GSMUA_AchrUn_...	Banana	nucleus	15.45	12.68
GSMUA_Achr3P14840_001	Banana	nucleus	14.16	11.66
GSMUA_Achr10P...	Banana	nucleus	12.45	10.9
GSMUA_Achr6P15910_001	Banana	nucleus	14.59	10.73
GSMUA_Achr3P09460_001	Banana	nucleus	14.16	10.31
GSMUA_Achr9P06660_001	Banana	nucleus	16.74	10.08
GSMUA_Achr5P27730_001	Banana	nucleus	13.3	9.94
GSMUA_Achr8P27170_001	Banana	nucleus	17.6	9.17
GSMUA_Achr9P05010_001	Banana	nucleus, plastid	14.16	9.09
GSMUA_Achr8P01590_001	Banana	nucleus	13.73	7.62

Protein Annotations

Gene3D:1.10.10.60	MapMan:15.5.3.6	GO:GO:0000003	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0007275
GO:GO:0008150	GO:GO:0008284	GO:GO:0009628	GO:GO:0009653	GO:GO:0009790	GO:GO:0009791
GO:GO:0009880	GO:GO:0009942	GO:GO:0009987	GO:GO:0010654	GO:GO:0030154	GO:GO:0048825
GO:GO:0080167	GO:GO:0090451	EnsemblPlantsGene:GSMUA_Achr10G26570_001	EnsemblPlants:GSMUA_Achr10P26570_001	EnsemblPlants:GSMUA_Achr10T26570_001	InterPro:Homeobox-like_sf
InterPro:Homeobox_dom	InterPro:IPR001356	UniProt:M0RLN1	PFAM:PF00046	PFscan:PS50071	PANTHER:PTHR24326
PANTHER:PTHR24326:SF203	SMART:SM00389	SUPFAM:SSF46689	UniParc:UPI000296AA8D	SEG:seg	:

Description

Putative WUSCHEL-related homeobox 2 [Source:GMGC_GENE;Acc:GSMUA_Achr10G26570_001]

Coordinates

chr10:-:30071143..30072384

Molecular Weight (calculated)

25732.2 Da

IEP (calculated)

8.896

GRAVY (calculated)

-0.743

Length

233 amino acids

Sequence
(BLAST)

001: MEGGKGSSSS SSSPSSSRWN PTKEQISVLE GLYKQGIRTP SAEQIQHITG KLREYGNIEG KNVFYWFQNH KARQRQKQKQ ESFAYFSRLL QRAPPPVLPP
101: TASSLPPLPT CTDGICPYTS LIRVGGVGYF HPQFPNVIFP AAAKRTDFQK MGMIQGRNQT PSRAGCRNTD ESGHETLQLF PLHPTGILER RPGSTPTSAS
201: TEIESVEEDE GKEEVGGENQ PLFNFFGGAN KQC

Best Arabidopsis Sequence Match ( AT5G59340.1 )
(BLAST)

001: MENEVNAGTA SSSRWNPTKD QITLLENLYK EGIRTPSADQ IQQITGRLRA YGHIEGKNVF YWFQNHKARQ RQKQKQERMA YFNRLLHKTS RFFYPPPCSN
101: VGCVSPYYLQ QASDHHMNQH GSVYTNDLLH RNNVMIPSGG YEKRTVTQHQ KQLSDIRTTA ATRMPISPSS LRFDRFALRD NCYAGEDINV NSSGRKTLPL
201: FPLQPLNASN ADGMGSSSFA LGSDSPVDCS SDGAGREQPF IDFFSGGSTS TRFDSNGNGL

Arabidopsis Description

WOX2WUSCHEL-related homeobox 2 [Source:UniProtKB/Swiss-Prot;Acc:Q6X7K1]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.