Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr4P29470_001 | Banana | nucleus | 50.0 | 66.67 |
| GSMUA_Achr4P25530_001 | Banana | nucleus | 57.73 | 60.19 |
| CDY41648 | Canola | nucleus | 39.55 | 50.88 |
| GSMUA_Achr1P17980_001 | Banana | nucleus | 54.09 | 50.21 |
| GSMUA_Achr7P04050_001 | Banana | nucleus | 50.91 | 47.86 |
| KRH60910 | Soybean | nucleus | 44.09 | 46.63 |
| GSMUA_AchrUn_... | Banana | nucleus | 58.18 | 45.07 |
| KRH51590 | Soybean | nucleus | 44.09 | 44.29 |
| VIT_04s0044g00150.t01 | Wine grape | nucleus | 46.82 | 43.1 |
| VIT_04s0044g00160.t01 | Wine grape | nucleus | 45.0 | 41.95 |
| GSMUA_Achr3P14840_001 | Banana | nucleus | 53.18 | 41.34 |
| GSMUA_Achr10P... | Banana | nucleus | 50.91 | 41.03 |
| Solyc02g082670.2.1 | Tomato | nucleus | 50.91 | 40.88 |
| VIT_18s0122g01140.t01 | Wine grape | nucleus | 50.91 | 40.14 |
| KRH70496 | Soybean | nucleus | 47.73 | 40.08 |
| PGSC0003DMT400003980 | Potato | nucleus | 50.0 | 40.0 |
| KRH36192 | Soybean | nucleus | 49.09 | 38.43 |
| CDX75511 | Canola | nucleus | 44.55 | 38.28 |
| Bra010531.1-P | Field mustard | nucleus | 40.91 | 38.14 |
| Bra011623.1-P | Field mustard | nucleus | 44.55 | 37.98 |
| KRH01611 | Soybean | nucleus | 45.91 | 37.97 |
| AT4G35550.1 | Thale cress | nucleus | 45.45 | 37.31 |
| CDX69148 | Canola | nucleus | 44.55 | 36.98 |
| KRG90565 | Soybean | nucleus | 47.73 | 36.97 |
| CDY24814 | Canola | nucleus | 40.0 | 36.82 |
| CDX72546 | Canola | nucleus | 43.64 | 36.78 |
| CDY40623 | Canola | nucleus | 43.64 | 36.5 |
| Bra017720.1-P | Field mustard | nucleus | 42.27 | 35.09 |
| GSMUA_Achr8P02040_001 | Banana | nucleus | 12.73 | 21.88 |
| GSMUA_Achr7P07430_001 | Banana | nucleus | 14.09 | 21.68 |
| GSMUA_Achr7P14860_001 | Banana | nucleus | 15.0 | 17.37 |
| GSMUA_Achr7P18230_001 | Banana | nucleus | 13.64 | 15.54 |
| GSMUA_Achr5P29220_001 | Banana | nucleus | 14.09 | 15.5 |
| GSMUA_Achr4P30610_001 | Banana | nucleus | 12.73 | 15.22 |
| GSMUA_Achr8P15620_001 | Banana | nucleus, plastid | 15.91 | 14.96 |
| GSMUA_Achr9P04090_001 | Banana | nucleus | 12.73 | 14.81 |
| GSMUA_Achr2P16080_001 | Banana | nucleus | 12.73 | 14.43 |
| GSMUA_Achr10P... | Banana | nucleus | 16.82 | 13.91 |
| GSMUA_Achr10P... | Banana | nucleus | 15.0 | 13.52 |
| GSMUA_Achr10P... | Banana | nucleus | 14.09 | 13.3 |
| GSMUA_Achr5P27730_001 | Banana | nucleus | 16.82 | 11.86 |
| GSMUA_Achr3P09460_001 | Banana | nucleus | 16.82 | 11.56 |
| GSMUA_Achr6P15910_001 | Banana | nucleus | 14.55 | 10.09 |
| GSMUA_Achr8P01590_001 | Banana | nucleus | 18.64 | 9.76 |
| GSMUA_Achr9P06660_001 | Banana | nucleus | 16.82 | 9.56 |
| GSMUA_Achr9P05010_001 | Banana | nucleus, plastid | 15.45 | 9.37 |
| GSMUA_Achr8P27170_001 | Banana | nucleus | 18.64 | 9.17 |
| HORVU1Hr1G087940.1 | Barley | cytosol, plasma membrane, plastid | 9.55 | 8.43 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.3.6 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | EnsemblPlantsGene:GSMUA_Achr5G11080_001 | EnsemblPlants:GSMUA_Achr5P11080_001 |
| EnsemblPlants:GSMUA_Achr5T11080_001 | InterPro:Homeobox-like_sf | InterPro:Homeobox_dom | InterPro:IPR001356 | UniProt:M0SXI7 | PFAM:PF00046 |
| PFscan:PS50071 | PANTHER:PTHR24326 | PANTHER:PTHR24326:SF340 | SMART:SM00389 | SUPFAM:SSF46689 | UniParc:UPI000296B593 |
| SEG:seg | : | : | : | : | : |
Description
Putative uncharacterized protein [Source:GMGC_GENE;Acc:GSMUA_Achr5G11080_001]
Coordinates
chr5:-:7987987..7989376
Molecular Weight (calculated)
24178.6 Da
IEP (calculated)
8.950
GRAVY (calculated)
-0.600
Length
220 amino acids
Sequence
(BLAST)
(BLAST)
001: MEEGMAAQGA SCVQVMTDEQ MELLRRQISA YAVICERLVE MHRAVSAQQD AFSGMKLSGL YNDPLVTYGG PKISARQRWT PTHMQLQTLE SLFYQGIGTP
101: SKQRIKEIVA ELSQHGQISE ANVYNWFQNR RARSKRKKTA AAPSNTESES EAKSLVEKKA KTAMAAAYSN LSPSVYDHSP ASNGSQGMYD YEAPESSKLS
201: GGSDGMPVYG ISISTPRKQP
101: SKQRIKEIVA ELSQHGQISE ANVYNWFQNR RARSKRKKTA AAPSNTESES EAKSLVEKKA KTAMAAAYSN LSPSVYDHSP ASNGSQGMYD YEAPESSKLS
201: GGSDGMPVYG ISISTPRKQP
001: MVKKKKEKEK SKEIEEMDRE IQNGAYSGRV MTEEQMEILR KQIAVYAVIC DQLVLLHNSL SSYHPLSSGV RPMVGGYFDP MGASSSSHRI STRHRWTPTS
101: TQLQILESIY DEGSGTPNRR RIREIATELS EHGQITETNV YNWFQNRRAR SKRKQPQTTT ANGQADDVAV TTEERRSCGD SGGLESYEHI LFPSPDLGKK
201: II
101: TQLQILESIY DEGSGTPNRR RIREIATELS EHGQITETNV YNWFQNRRAR SKRKQPQTTT ANGQADDVAV TTEERRSCGD SGGLESYEHI LFPSPDLGKK
201: II
Arabidopsis Description
WOX14WUSCHEL-related homeobox 14 [Source:UniProtKB/Swiss-Prot;Acc:Q9LM84]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.