Factsheet for GSMUA_Achr6P15910_001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr10P...	Banana	nucleus	49.84	64.75
Os07t0684900-01	Rice	nucleus	48.9	59.16
Zm00001d022524_P001	Maize	nucleus	46.37	56.76
TraesCS2B01G117900.1	Wheat	nucleus	45.43	55.17
TraesCS2A01G100700.1	Wheat	nucleus	45.74	54.72
TraesCS2D01G100200.1	Wheat	nucleus	45.11	54.17
GSMUA_Achr10P...	Banana	nucleus	42.9	51.13
GSMUA_Achr5P27730_001	Banana	nucleus	49.53	50.32
VIT_08s0056g01200.t01	Wine grape	nucleus	37.22	50.0
KXG39473	Sorghum	nucleus	48.9	49.36
TraesCS4D01G176400.1	Wheat	nucleus	47.0	48.69
TraesCS4B01G174400.1	Wheat	nucleus	47.32	48.54
TraesCS4A01G130200.1	Wheat	nucleus	46.69	48.21
Zm00001d047559_P001	Maize	nucleus	47.63	47.94
PGSC0003DMT400069529	Potato	nucleus	36.59	47.35
Zm00001d028986_P001	Maize	nucleus	47.95	47.06
OQU90491	Sorghum	nucleus	37.85	46.15
TraesCS3A01G073500.1	Wheat	nucleus	37.22	45.38
KRG94925	Soybean	nucleus	39.75	45.0
GSMUA_Achr3P09460_001	Banana	nucleus	45.43	45.0
TraesCS3D01G073300.1	Wheat	nucleus	36.91	44.83
Solyc06g072890.1.1	Tomato	nucleus	37.22	44.7
TraesCS3B01G087800.1	Wheat	nucleus	36.59	44.44
KXG24798	Sorghum	nucleus	38.49	44.2
HORVU3Hr1G013290.3	Barley	nucleus	36.28	44.06
CDY38461	Canola	nucleus	37.85	43.8
Bra036446.1-P	Field mustard	nucleus	36.59	43.77
Os08t0242400-01	Rice	nucleus	38.8	43.31
Bra002108.1-P	Field mustard	nucleus	37.22	43.22
KRH64971	Soybean	nucleus	40.06	43.05
CDY16883	Canola	nucleus	36.91	42.39
Os03t0325600-01	Rice	nucleus	47.32	42.13
AT5G17810.2	Thale cress	nucleus	35.33	41.79
CDY21173	Canola	nucleus	37.85	41.52
CDY29949	Canola	nucleus	37.85	41.52
Bra023638.1-P	Field mustard	nucleus	35.96	41.45
HORVU3Hr1G013330.1	Barley	nucleus	25.24	41.24
CDY02686	Canola	nucleus	36.28	40.64
CDY66087	Canola	nucleus	35.02	39.64
Zm00001d024410_P001	Maize	nucleus	36.28	39.12
GSMUA_Achr9P05010_001	Banana	nucleus, plastid	44.48	38.84
AT3G03660.3	Thale cress	nucleus, plastid	38.8	37.73
GSMUA_Achr8P01590_001	Banana	nucleus	48.58	36.67
Bra031980.1-P	Field mustard	nucleus	36.59	36.02
CDY51756	Canola	plastid	36.59	35.58
CDY50656	Canola	nucleus	37.54	35.1
CDY72488	Canola	nucleus, plastid	26.81	34.41
HORVU4Hr1G051530.5	Barley	nucleus	36.91	33.91
GSMUA_Achr8P02040_001	Banana	nucleus	9.15	22.66
GSMUA_Achr9P06660_001	Banana	nucleus	26.5	21.71
GSMUA_Achr7P07430_001	Banana	nucleus	8.83	19.58
GSMUA_Achr7P14860_001	Banana	nucleus	11.36	18.95
GSMUA_Achr8P27170_001	Banana	nucleus	25.87	18.34
GSMUA_Achr7P18230_001	Banana	nucleus	11.04	18.13
GSMUA_Achr2P16080_001	Banana	nucleus	11.04	18.04
GSMUA_Achr4P30610_001	Banana	nucleus	10.41	17.93
GSMUA_Achr4P29470_001	Banana	nucleus	9.15	17.58
GSMUA_Achr8P15620_001	Banana	nucleus, plastid	12.93	17.52
GSMUA_Achr9P04090_001	Banana	nucleus	10.09	16.93
GSMUA_Achr5P29220_001	Banana	nucleus	10.41	16.5
GSMUA_Achr4P25530_001	Banana	nucleus	10.41	15.64
GSMUA_Achr1P17980_001	Banana	nucleus	11.36	15.19
GSMUA_Achr7P04050_001	Banana	nucleus	11.04	14.96
GSMUA_Achr10P...	Banana	nucleus	10.73	14.59
GSMUA_Achr5P11080_001	Banana	nucleus	10.09	14.55
GSMUA_Achr10P...	Banana	nucleus	11.04	12.82
GSMUA_AchrUn_...	Banana	nucleus	11.36	12.68
GSMUA_Achr3P14840_001	Banana	nucleus	10.73	12.01

Protein Annotations

Gene3D:1.10.10.60	MapMan:15.5.3.6	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0005488
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	EnsemblPlantsGene:GSMUA_Achr6G15910_001	EnsemblPlants:GSMUA_Achr6P15910_001
EnsemblPlants:GSMUA_Achr6T15910_001	InterPro:Homeobox-like_sf	InterPro:Homeobox_dom	InterPro:IPR001356	UniProt:M0T7D9	PFAM:PF00046
PFscan:PS50071	PANTHER:PTHR24326	PANTHER:PTHR24326:SF280	SMART:SM00389	SUPFAM:SSF46689	UniParc:UPI000294930B
SEG:seg	:	:	:	:	:

Description

Putative WUSCHEL-related homeobox 12 [Source:GMGC_GENE;Acc:GSMUA_Achr6G15910_001]

Coordinates

chr6:+:10630925..10632215

Molecular Weight (calculated)

35326.9 Da

IEP (calculated)

9.570

GRAVY (calculated)

-0.112

Length

317 amino acids

Sequence
(BLAST)

001: MDGRNGSPNR GLAGAEPVRS RWTPKPEQIL ILESIFNSGM VNPPKDETVR IRKLLEKFGS VGDANVFYWF QNRRSRSRRR QRQLQAAGLA ADPGAAMHAR
101: QVGGAALYEP TSTGILVGDD GGADDLFFSR QMGFMENLLT HITTKLGLYL LFGSRIRQLD KKDYVDLKAN DLCFSAQLKA APSFGVRKKH HAKDYFEAIT
201: SEILSSPTAC LNAGTITVFI NGIPSEVPRG PIDLRAMFGQ NVMLVHSSGE LLPINEYGIL LQSLQMGESY FLVSFSKQLM LLISISLSLS LSRCVCTCVY
301: THIFMFIRRT RHTPWCE

Best Arabidopsis Sequence Match ( AT5G17810.1 )
(BLAST)

001: MNQEGASHSP SSTSTEPVRA RWSPKPEQIL ILESIFNSGT VNPPKDETVR IRKMLEKFGA VGDANVFYWF QNRRSRSRRR HRQLLAATTA AATSIGAEDH
101: QHMTAMSMHQ YPCSNNEIDL GFGSCSNLSA NYFLNGSSSS QIPSFFLGLS SSSGGCENNN GMENLFKMYG HESDHNHQQQ HHSSNAASVL NPSDQNSNSQ
201: YEQEGFMTVF INGVPMEVTK GAIDMKTMFG DDSVLLHSSG LPLPTDEFGF LMHSLQHGQT YFLVPRQT

Arabidopsis Description

WOX12WUSCHEL-related homeobox 12 [Source:UniProtKB/Swiss-Prot;Acc:Q8GY25]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.