Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra002108.1-P | Field mustard | nucleus | 96.38 | 97.44 |
| CDY38461 | Canola | nucleus | 94.2 | 94.89 |
| CDY66087 | Canola | nucleus | 82.61 | 81.43 |
| CDY02686 | Canola | nucleus | 82.97 | 80.92 |
| AT5G17810.2 | Thale cress | nucleus | 74.28 | 76.49 |
| CDY21173 | Canola | nucleus | 63.41 | 60.55 |
| CDY29949 | Canola | nucleus | 63.41 | 60.55 |
| VIT_08s0056g01200.t01 | Wine grape | nucleus | 47.1 | 55.08 |
| CDY51756 | Canola | plastid | 63.41 | 53.68 |
| PGSC0003DMT400069529 | Potato | nucleus | 46.74 | 52.65 |
| CDY72488 | Canola | nucleus, plastid | 47.1 | 52.63 |
| CDY50656 | Canola | nucleus | 64.13 | 52.21 |
| Solyc06g072890.1.1 | Tomato | nucleus | 47.83 | 50.0 |
| Os07t0684900-01 | Rice | nucleus | 44.57 | 46.95 |
| KRG94925 | Soybean | nucleus | 47.1 | 46.43 |
| TraesCS2B01G117900.1 | Wheat | nucleus | 43.84 | 46.36 |
| GSMUA_Achr10P... | Banana | nucleus | 40.94 | 46.31 |
| TraesCS2A01G100700.1 | Wheat | nucleus | 43.84 | 45.66 |
| Zm00001d022524_P001 | Maize | nucleus | 42.75 | 45.56 |
| TraesCS2D01G100200.1 | Wheat | nucleus | 43.48 | 45.45 |
| KRH64971 | Soybean | nucleus | 47.46 | 44.41 |
| TraesCS4B01G174400.1 | Wheat | nucleus | 46.74 | 41.75 |
| TraesCS4D01G176400.1 | Wheat | nucleus | 46.01 | 41.5 |
| TraesCS4A01G130200.1 | Wheat | nucleus | 46.01 | 41.37 |
| KXG39473 | Sorghum | nucleus | 45.65 | 40.13 |
| Zm00001d047559_P001 | Maize | nucleus | 45.65 | 40.0 |
| Os08t0242400-01 | Rice | nucleus | 40.58 | 39.44 |
| TraesCS3A01G073500.1 | Wheat | nucleus | 36.96 | 39.23 |
| HORVU3Hr1G013290.3 | Barley | nucleus | 36.96 | 39.08 |
| TraesCS3D01G073300.1 | Wheat | nucleus | 36.96 | 39.08 |
| TraesCS3B01G087800.1 | Wheat | nucleus | 36.59 | 38.7 |
| GSMUA_Achr10P... | Banana | nucleus | 36.96 | 38.35 |
| Zm00001d028986_P001 | Maize | nucleus | 44.57 | 38.08 |
| OQU90491 | Sorghum | nucleus | 35.87 | 38.08 |
| GSMUA_Achr3P09460_001 | Banana | nucleus | 43.84 | 37.81 |
| KXG24798 | Sorghum | nucleus | 37.32 | 37.32 |
| HORVU3Hr1G013330.1 | Barley | nucleus | 26.09 | 37.11 |
| GSMUA_Achr6P15910_001 | Banana | nucleus | 42.39 | 36.91 |
| GSMUA_Achr5P27730_001 | Banana | nucleus | 40.22 | 35.58 |
| Os03t0325600-01 | Rice | nucleus | 44.93 | 34.83 |
| Zm00001d024410_P001 | Maize | nucleus | 35.87 | 33.67 |
| GSMUA_Achr9P05010_001 | Banana | nucleus, plastid | 43.12 | 32.78 |
| HORVU4Hr1G051530.5 | Barley | nucleus | 35.87 | 28.7 |
| GSMUA_Achr8P01590_001 | Banana | nucleus | 42.75 | 28.1 |
| CDX87744 | Canola | nucleus | 30.8 | 26.56 |
| CDY48780 | Canola | nucleus | 30.8 | 26.56 |
| CDY69228 | Canola | nucleus | 32.97 | 23.33 |
| CDY17211 | Canola | nucleus | 32.97 | 23.33 |
| CDX79549 | Canola | nucleus | 30.8 | 21.41 |
| CDY01358 | Canola | nucleus | 10.14 | 21.05 |
| CDX93197 | Canola | nucleus | 13.77 | 19.49 |
| CDY31870 | Canola | nucleus | 13.77 | 19.49 |
| CDY70975 | Canola | nucleus | 11.59 | 19.28 |
| CDY71075 | Canola | nucleus | 7.61 | 17.36 |
| CDY29511 | Canola | nucleus | 12.68 | 17.24 |
| CDY65899 | Canola | nucleus | 12.68 | 16.75 |
| CDY41648 | Canola | nucleus | 10.14 | 16.37 |
| CDY01007 | Canola | nucleus | 11.23 | 16.23 |
| CDY08539 | Canola | nucleus | 10.51 | 15.18 |
| CDX69148 | Canola | nucleus | 14.49 | 15.09 |
| CDY24814 | Canola | nucleus | 13.04 | 15.06 |
| CDY31716 | Canola | nucleus | 12.68 | 14.96 |
| CDX72546 | Canola | nucleus | 14.13 | 14.94 |
| CDX75511 | Canola | nucleus | 13.77 | 14.84 |
| CDY40623 | Canola | nucleus | 14.13 | 14.83 |
| CDY14103 | Canola | nucleus | 10.14 | 14.66 |
| CDX70130 | Canola | nucleus | 10.14 | 14.58 |
| CDX98862 | Canola | nucleus | 10.14 | 14.58 |
| CDY04966 | Canola | nucleus | 9.78 | 14.14 |
| CDY40847 | Canola | nucleus | 13.04 | 14.12 |
| CDY17046 | Canola | nucleus | 13.04 | 14.06 |
| CDY02582 | Canola | nucleus | 6.16 | 14.05 |
| CDX77191 | Canola | nucleus | 11.96 | 13.98 |
| CDX95764 | Canola | nucleus | 10.87 | 13.51 |
| CDX83299 | Canola | nucleus | 10.87 | 13.27 |
| CDY43848 | Canola | nucleus | 11.96 | 13.15 |
| CDY30337 | Canola | nucleus | 14.86 | 12.97 |
| CDY29212 | Canola | nucleus | 13.77 | 12.93 |
| CDY47803 | Canola | nucleus | 14.13 | 12.91 |
| CDY25659 | Canola | nucleus | 11.59 | 12.75 |
| CDY41086 | Canola | nucleus | 12.32 | 12.73 |
| CDY38144 | Canola | nucleus | 13.77 | 12.58 |
| CDY55370 | Canola | nucleus | 13.77 | 12.58 |
| CDY02885 | Canola | nucleus | 8.7 | 12.06 |
| CDX80277 | Canola | nucleus | 9.06 | 11.9 |
| CDY33030 | Canola | nucleus | 9.06 | 11.9 |
| CDY33728 | Canola | nucleus | 11.59 | 11.64 |
| CDY32648 | Canola | nucleus | 7.25 | 11.43 |
| CDX81686 | Canola | nucleus | 11.96 | 11.38 |
| CDY51928 | Canola | nucleus | 13.77 | 10.76 |
| CDX92182 | Canola | nucleus | 13.41 | 10.54 |
| CDY66658 | Canola | nucleus | 13.41 | 10.54 |
| CDX75955 | Canola | nucleus | 13.04 | 10.29 |
| CDY29211 | Canola | mitochondrion | 4.71 | 8.72 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.3.6 | GO:A0A078FWT7 | UniProt:A0A078FWT7 | EnsemblPlants:CDY16883 | ProteinID:CDY16883 |
| ProteinID:CDY16883.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | EnsemblPlantsGene:GSBRNA2T00094778001 | InterPro:Homeobox-like_sf | InterPro:Homeobox_dom |
| InterPro:IPR001356 | PFAM:PF00046 | PFscan:PS50071 | PANTHER:PTHR24326 | PANTHER:PTHR24326:SF185 | SMART:SM00389 |
| SUPFAM:SSF46689 | UniParc:UPI0004EEE39B | SEG:seg | : | : | : |
Description
BnaC09g40100DBnaC09g40100D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FWT7]
Coordinates
chrLK032068:+:79223..81180
Molecular Weight (calculated)
30549.5 Da
IEP (calculated)
6.442
GRAVY (calculated)
-0.534
Length
276 amino acids
Sequence
(BLAST)
(BLAST)
001: MDQEGSPQSR QGRSPSATSN STEPVRTRWS PKPEQILILE SIFNSGIVNP PKDETVRIRK MLEKFGAVGD ANVFYWFQNR RSRSRRRQRQ LQAANAAAIA
101: TRGVEDPQHM TTMSMHHPYS NNEIDLGFGS CSNSSANYLF NESSSQVSSF LLGLSSSSTN GGCESNNSMA DLFTMYGHES DHHHFHHPQH SSNDASIPSP
201: SDQNSNIHYQ QGLMTVFING VPTEVTNGAI DMKAMFGEDL VLLHSSGLPL PTDEFGFLIS LQHGQSYFLT FLCSSV
101: TRGVEDPQHM TTMSMHHPYS NNEIDLGFGS CSNSSANYLF NESSSQVSSF LLGLSSSSTN GGCESNNSMA DLFTMYGHES DHHHFHHPQH SSNDASIPSP
201: SDQNSNIHYQ QGLMTVFING VPTEVTNGAI DMKAMFGEDL VLLHSSGLPL PTDEFGFLIS LQHGQSYFLT FLCSSV
001: MNQEGASHSP SSTSTEPVRA RWSPKPEQIL ILESIFNSGT VNPPKDETVR IRKMLEKFGA VGDANVFYWF QNRRSRSRRR HRQLLAATTA AATSIGAEDH
101: QHMTAMSMHQ YPCSNNEIDL GFGSCSNLSA NYFLNGSSSS QIPSFFLGLS SSSGGCENNN GMENLFKMYG HESDHNHQQQ HHSSNAASVL NPSDQNSNSQ
201: YEQGFMTVFI NGVPMEVTKG AIDMKTMFGD DSVLLHSSGL PLPTDEFGFL MHSLQHGQTY FLVPRQT
101: QHMTAMSMHQ YPCSNNEIDL GFGSCSNLSA NYFLNGSSSS QIPSFFLGLS SSSGGCENNN GMENLFKMYG HESDHNHQQQ HHSSNAASVL NPSDQNSNSQ
201: YEQGFMTVFI NGVPMEVTKG AIDMKTMFGD DSVLLHSSGL PLPTDEFGFL MHSLQHGQTY FLVPRQT
Arabidopsis Description
WOX12WUSCHEL-related homeobox 12 [Source:UniProtKB/Swiss-Prot;Acc:Q8GY25]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.