Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra020321.1-P | Field mustard | nucleus | 98.86 | 86.93 |
| CDY02885 | Canola | nucleus | 95.43 | 83.92 |
| CDY33030 | Canola | nucleus | 78.86 | 65.71 |
| CDX80277 | Canola | nucleus | 78.86 | 65.71 |
| AT5G59340.1 | Thale cress | nucleus | 77.14 | 51.92 |
| KRH23053 | Soybean | nucleus | 31.43 | 25.94 |
| KRH10279 | Soybean | nucleus | 30.29 | 24.2 |
| GSMUA_Achr10P... | Banana | nucleus | 29.14 | 21.89 |
| Solyc06g076000.1.1 | Tomato | nucleus | 29.71 | 21.67 |
| PGSC0003DMT400077947 | Potato | nucleus | 29.14 | 21.61 |
| KRH29810 | Soybean | nucleus | 30.86 | 20.69 |
| CDX95764 | Canola | nucleus | 22.29 | 17.57 |
| KRH24809 | Soybean | nucleus | 32.57 | 17.43 |
| CDY71075 | Canola | nucleus | 12.0 | 17.36 |
| CDY70975 | Canola | nucleus | 16.0 | 16.87 |
| CDX83299 | Canola | nucleus | 21.71 | 16.81 |
| CDY14103 | Canola | nucleus | 18.29 | 16.75 |
| CDY04966 | Canola | nucleus | 18.29 | 16.75 |
| CDX70130 | Canola | nucleus | 17.71 | 16.15 |
| CDX98862 | Canola | nucleus | 17.71 | 16.15 |
| CDX77191 | Canola | nucleus | 20.0 | 14.83 |
| CDY01007 | Canola | nucleus | 16.0 | 14.66 |
| CDY08539 | Canola | nucleus | 16.0 | 14.66 |
| CDY31716 | Canola | nucleus | 19.43 | 14.53 |
| CDY41086 | Canola | nucleus | 20.57 | 13.48 |
| CDY02582 | Canola | nucleus | 9.14 | 13.22 |
| CDY40847 | Canola | nucleus | 18.86 | 12.94 |
| CDY17046 | Canola | nucleus | 18.86 | 12.89 |
| CDY43848 | Canola | nucleus | 18.29 | 12.75 |
| CDY25659 | Canola | nucleus | 17.71 | 12.35 |
| CDY33728 | Canola | nucleus | 18.29 | 11.64 |
| CDY01358 | Canola | nucleus | 8.57 | 11.28 |
| CDX75955 | Canola | nucleus | 21.71 | 10.86 |
| CDX92182 | Canola | nucleus | 21.71 | 10.83 |
| CDY51928 | Canola | nucleus | 21.71 | 10.76 |
| CDY55370 | Canola | nucleus | 18.29 | 10.6 |
| CDY38144 | Canola | nucleus | 18.29 | 10.6 |
| CDY29212 | Canola | nucleus | 17.71 | 10.54 |
| CDY66658 | Canola | nucleus | 21.14 | 10.54 |
| CDX81686 | Canola | nucleus | 17.14 | 10.34 |
| CDY30337 | Canola | nucleus | 18.29 | 10.13 |
| CDY47803 | Canola | nucleus | 17.14 | 9.93 |
| CDX93197 | Canola | nucleus | 10.29 | 9.23 |
| CDY31870 | Canola | nucleus | 10.29 | 9.23 |
| CDY41648 | Canola | nucleus | 8.57 | 8.77 |
| CDY72488 | Canola | nucleus, plastid | 12.0 | 8.5 |
| CDY24814 | Canola | nucleus | 11.43 | 8.37 |
| CDX69148 | Canola | nucleus | 12.57 | 8.3 |
| CDX75511 | Canola | nucleus | 12.0 | 8.2 |
| CDX72546 | Canola | nucleus | 12.0 | 8.05 |
| CDY40623 | Canola | nucleus | 12.0 | 7.98 |
| CDY29511 | Canola | nucleus | 9.14 | 7.88 |
| CDX87744 | Canola | nucleus | 14.29 | 7.81 |
| CDY48780 | Canola | nucleus | 14.29 | 7.81 |
| CDY65899 | Canola | nucleus | 9.14 | 7.66 |
| CDY02686 | Canola | nucleus | 12.0 | 7.42 |
| CDY29211 | Canola | mitochondrion | 6.29 | 7.38 |
| CDY21173 | Canola | nucleus | 12.0 | 7.27 |
| CDY29949 | Canola | nucleus | 12.0 | 7.27 |
| CDY16883 | Canola | nucleus | 11.43 | 7.25 |
| CDY66087 | Canola | nucleus | 11.43 | 7.14 |
| CDY38461 | Canola | nucleus | 10.86 | 6.93 |
| CDY51756 | Canola | plastid | 11.43 | 6.13 |
| CDY50656 | Canola | nucleus | 11.43 | 5.9 |
| CDX79549 | Canola | nucleus | 13.14 | 5.79 |
| CDY69228 | Canola | nucleus | 12.0 | 5.38 |
| CDY17211 | Canola | nucleus | 11.43 | 5.13 |
Protein Annotations
| EnsemblPlants:CDY32648 | EnsemblPlantsGene:GSBRNA2T00052688001 | GO:A0A078H740 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | InterPro:Homeobox_dom |
| InterPro:IPR001356 | PANTHER:PTHR24326 | PANTHER:PTHR24326:SF203 | PFAM:PF00046 | ProteinID:CDY32648 | ProteinID:CDY32648.1 |
| SEG:seg | UniParc:UPI0004EE8DC2 | UniProt:A0A078H740 | MapMan:35.1 | : | : |
Description
BnaA02g07100DBnaA02g07100D protein [Source:UniProtKB/TrEMBL;Acc:A0A078H740]
Coordinates
chrLK032298:+:7109..8160
Molecular Weight (calculated)
19237.2 Da
IEP (calculated)
6.884
GRAVY (calculated)
-0.709
Length
175 amino acids
Sequence
(BLAST)
(BLAST)
001: MEKEGKVGTA SSSRWNPTKE QITLLENLYK EGIRTPSADQ IQQITVGCVS PYYLQQVGDH HNQHGHGSVY RHSNNVMNPN GGYDKRTITD HKKQLSDITT
101: TAARLSMSSS SLRFDRFALC DHGYNGEDLN VNSNGPKTLS LFPLQPLDAA SEDGQPFIDF FSGGSSRFAN SANGL
101: TAARLSMSSS SLRFDRFALC DHGYNGEDLN VNSNGPKTLS LFPLQPLDAA SEDGQPFIDF FSGGSSRFAN SANGL
001: MENEVNAGTA SSSRWNPTKD QITLLENLYK EGIRTPSADQ IQQITGRLRA YGHIEGKNVF YWFQNHKARQ RQKQKQERMA YFNRLLHKTS RFFYPPPCSN
101: VGCVSPYYLQ QASDHHMNQH GSVYTNDLLH RNNVMIPSGG YEKRTVTQHQ KQLSDIRTTA ATRMPISPSS LRFDRFALRD NCYAGEDINV NSSGRKTLPL
201: FPLQPLNASN ADGMGSSSFA LGSDSPVDCS SDGAGREQPF IDFFSGGSTS TRFDSNGNGL
101: VGCVSPYYLQ QASDHHMNQH GSVYTNDLLH RNNVMIPSGG YEKRTVTQHQ KQLSDIRTTA ATRMPISPSS LRFDRFALRD NCYAGEDINV NSSGRKTLPL
201: FPLQPLNASN ADGMGSSSFA LGSDSPVDCS SDGAGREQPF IDFFSGGSTS TRFDSNGNGL
Arabidopsis Description
WOX2WUSCHEL-related homeobox 2 [Source:UniProtKB/Swiss-Prot;Acc:Q6X7K1]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.