Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra026791.1-P | Field mustard | nucleus | 77.09 | 81.85 |
| CDX81686 | Canola | nucleus | 82.91 | 78.62 |
| CDY70975 | Canola | nucleus | 24.73 | 40.96 |
| AT2G01500.1 | Thale cress | nucleus | 32.36 | 32.84 |
| CDY41086 | Canola | nucleus | 30.91 | 31.84 |
| CDY02582 | Canola | nucleus | 12.0 | 27.27 |
| CDY71075 | Canola | nucleus | 11.64 | 26.45 |
| CDY08539 | Canola | nucleus | 18.18 | 26.18 |
| CDY01007 | Canola | nucleus | 17.82 | 25.65 |
| CDX70130 | Canola | nucleus | 17.45 | 25.0 |
| CDX98862 | Canola | nucleus | 17.45 | 25.0 |
| CDY14103 | Canola | nucleus | 17.09 | 24.61 |
| CDY04966 | Canola | nucleus | 17.09 | 24.61 |
| CDY31716 | Canola | nucleus | 18.91 | 22.22 |
| CDX83299 | Canola | nucleus | 18.18 | 22.12 |
| CDX95764 | Canola | nucleus | 17.82 | 22.07 |
| CDX77191 | Canola | nucleus | 18.91 | 22.03 |
| CDY51928 | Canola | nucleus | 26.91 | 20.96 |
| CDY40847 | Canola | nucleus | 19.27 | 20.78 |
| CDX75955 | Canola | nucleus | 26.18 | 20.57 |
| CDY66658 | Canola | nucleus | 26.18 | 20.51 |
| CDY17046 | Canola | nucleus | 18.91 | 20.31 |
| CDX92182 | Canola | nucleus | 25.45 | 19.94 |
| CDY43848 | Canola | nucleus | 17.82 | 19.52 |
| CDY01358 | Canola | nucleus | 9.09 | 18.8 |
| CDY25659 | Canola | nucleus | 17.09 | 18.73 |
| CDY32648 | Canola | nucleus | 11.64 | 18.29 |
| CDY55370 | Canola | nucleus | 19.64 | 17.88 |
| CDY47803 | Canola | nucleus | 19.64 | 17.88 |
| CDY38144 | Canola | nucleus | 19.27 | 17.55 |
| CDY33030 | Canola | nucleus | 13.09 | 17.14 |
| CDY30337 | Canola | nucleus | 19.64 | 17.09 |
| CDY29212 | Canola | nucleus | 18.18 | 17.01 |
| CDY41648 | Canola | nucleus | 10.55 | 16.96 |
| CDX80277 | Canola | nucleus | 12.73 | 16.67 |
| CDY02885 | Canola | nucleus | 11.64 | 16.08 |
| CDX93197 | Canola | nucleus | 10.55 | 14.87 |
| CDY31870 | Canola | nucleus | 10.55 | 14.87 |
| CDY29511 | Canola | nucleus | 10.55 | 14.29 |
| CDX75511 | Canola | nucleus | 13.09 | 14.06 |
| CDY65899 | Canola | nucleus | 10.55 | 13.88 |
| CDX87744 | Canola | nucleus | 15.64 | 13.44 |
| CDY72488 | Canola | nucleus, plastid | 12.0 | 13.36 |
| CDX69148 | Canola | nucleus | 12.73 | 13.21 |
| CDY48780 | Canola | nucleus | 15.27 | 13.12 |
| CDX72546 | Canola | nucleus | 12.36 | 13.03 |
| CDY24814 | Canola | nucleus | 11.27 | 12.97 |
| CDY40623 | Canola | nucleus | 12.36 | 12.93 |
| CDY38461 | Canola | nucleus | 12.0 | 12.04 |
| CDY29949 | Canola | nucleus | 12.36 | 11.76 |
| CDY21173 | Canola | nucleus | 12.36 | 11.76 |
| CDY16883 | Canola | nucleus | 11.64 | 11.59 |
| CDY69228 | Canola | nucleus | 16.36 | 11.54 |
| CDY66087 | Canola | nucleus | 11.64 | 11.43 |
| CDX79549 | Canola | nucleus | 16.36 | 11.34 |
| CDY02686 | Canola | nucleus | 11.64 | 11.31 |
| CDY17211 | Canola | nucleus | 16.0 | 11.28 |
| CDY51756 | Canola | plastid | 12.73 | 10.74 |
| CDY50656 | Canola | nucleus | 12.73 | 10.32 |
| CDY29211 | Canola | mitochondrion | 4.36 | 8.05 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.3.6 | GO:A0A078HA42 | UniProt:A0A078HA42 | EnsemblPlants:CDY33728 | ProteinID:CDY33728 |
| ProteinID:CDY33728.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | EnsemblPlantsGene:GSBRNA2T00055136001 | InterPro:Homeobox-like_sf | InterPro:Homeobox_dom |
| InterPro:IPR001356 | PFAM:PF00046 | PFscan:PS50071 | PANTHER:PTHR24326 | PANTHER:PTHR24326:SF509 | SMART:SM00389 |
| SUPFAM:SSF46689 | UniParc:UPI0004EE73FB | SEG:seg | : | : | : |
Description
BnaA09g45340DBnaA09g45340D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HA42]
Coordinates
chrLK032321:-:30010..31395
Molecular Weight (calculated)
31963.6 Da
IEP (calculated)
6.745
GRAVY (calculated)
-1.331
Length
275 amino acids
Sequence
(BLAST)
(BLAST)
001: MGYNKDLTSH TLAHHCNIND IRNDEQIIAG SEGKPKEREK YMHSRWNPTP EQTMVLEKVY SSGTRTPTTQ QIQDIASKLQ KYGRIEGKNV FYWFQNHKSR
101: EKLKRRRGDQ QGVTAINNVH EESLNKDNAT ANKASSSVSR RRGDHRVIHT RTSLSSSPTH PQKNNVDDGK REHYETGVKD EEATGQNQKN PIYTSEFKYH
201: LKVASKPSQE ADQQYTLNDD DDDEEEEEET RKSRTLDLFP VTENQETTGF AETNTKPNQL YCNYCYYYEF MPLMN
101: EKLKRRRGDQ QGVTAINNVH EESLNKDNAT ANKASSSVSR RRGDHRVIHT RTSLSSSPTH PQKNNVDDGK REHYETGVKD EEATGQNQKN PIYTSEFKYH
201: LKVASKPSQE ADQQYTLNDD DDDEEEEEET RKSRTLDLFP VTENQETTGF AETNTKPNQL YCNYCYYYEF MPLMN
001: MGYISNNNLI NYLPLSTTQP PLLLTHCDIN GNDHHQLITA SSGEHDIDER KNNIPAAATL RWNPTPEQIT TLEELYRSGT RTPTTEQIQQ IASKLRKYGR
101: IEGKNVFYWF QNHKARERLK RRRREGGAII KPHKDVKDSS SGGHRVDQTK LCPSFPHTNR PQPQHELDPA SYNKDNNANN EDHGTTEESD QRASEVGKYA
201: TWRNLVTWSI TQQPEEINID ENVNGEEEET RDNRTLNLFP VREYQEKTGR LIEKTKACNY CYYYEFMPLK N
101: IEGKNVFYWF QNHKARERLK RRRREGGAII KPHKDVKDSS SGGHRVDQTK LCPSFPHTNR PQPQHELDPA SYNKDNNANN EDHGTTEESD QRASEVGKYA
201: TWRNLVTWSI TQQPEEINID ENVNGEEEET RDNRTLNLFP VREYQEKTGR LIEKTKACNY CYYYEFMPLK N
Arabidopsis Description
WOX6WUSCHEL-related homeobox 6 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZVF5]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.