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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid, nucleus

Predictor Summary:
  • nucleus 3
  • plastid 3
  • golgi 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra036446.1-P Field mustard nucleus 85.02 79.25
CDY21173 Canola nucleus 90.69 77.51
CDY29949 Canola nucleus 90.69 77.51
AT3G03660.3 Thale cress nucleus, plastid 69.64 52.76
CDY51756 Canola plastid 69.64 52.76
CDY50656 Canola nucleus 70.85 51.62
CDY38461 Canola nucleus 52.63 47.45
CDY16883 Canola nucleus 52.63 47.1
CDY02686 Canola nucleus 53.44 46.64
CDY66087 Canola nucleus 52.63 46.43
VIT_08s0056g01200.t01 Wine grape nucleus 38.46 40.25
KRG94925 Soybean nucleus 42.91 37.86
TraesCS2D01G100200.1 Wheat nucleus 39.68 37.12
HORVU3Hr1G013330.1 Barley nucleus 29.15 37.11
Os07t0684900-01 Rice nucleus 39.27 37.02
TraesCS2B01G117900.1 Wheat nucleus 38.87 36.78
PGSC0003DMT400069529 Potato nucleus 36.44 36.73
Zm00001d022524_P001 Maize nucleus 38.46 36.68
TraesCS2A01G100700.1 Wheat nucleus 38.87 36.23
GSMUA_Achr10P... Banana nucleus 35.63 36.07
Solyc06g072890.1.1 Tomato nucleus 37.65 35.23
OQU90491 Sorghum nucleus 36.84 35.0
KRH64971 Soybean nucleus 41.7 34.92
TraesCS4B01G174400.1 Wheat nucleus 40.89 32.69
TraesCS4D01G176400.1 Wheat nucleus 40.49 32.68
TraesCS4A01G130200.1 Wheat nucleus 40.49 32.57
KXG39473 Sorghum nucleus 40.49 31.85
Zm00001d047559_P001 Maize nucleus 40.49 31.75
Zm00001d028986_P001 Maize nucleus 41.3 31.58
TraesCS3A01G073500.1 Wheat nucleus 31.17 29.62
Os08t0242400-01 Rice nucleus 34.01 29.58
TraesCS3D01G073300.1 Wheat nucleus 31.17 29.5
TraesCS3B01G087800.1 Wheat nucleus 30.77 29.12
HORVU3Hr1G013290.3 Barley nucleus 30.77 29.12
KXG24798 Sorghum nucleus 31.98 28.62
Os03t0325600-01 Rice nucleus 40.89 28.37
HORVU4Hr1G051530.5 Barley nucleus 39.27 28.12
GSMUA_Achr3P09460_001 Banana nucleus 35.63 27.5
GSMUA_Achr6P15910_001 Banana nucleus 34.41 26.81
Zm00001d024410_P001 Maize nucleus 31.17 26.19
GSMUA_Achr5P27730_001 Banana nucleus 32.79 25.96
GSMUA_Achr10P... Banana nucleus 27.94 25.94
GSMUA_Achr9P05010_001 Banana nucleus, plastid 36.03 24.52
CDY01358 Canola nucleus 12.15 22.56
CDX93197 Canola nucleus 16.19 20.51
CDY31870 Canola nucleus 16.19 20.51
CDY70975 Canola nucleus 13.77 20.48
GSMUA_Achr8P01590_001 Banana nucleus 33.6 19.76
CDX87744 Canola nucleus 24.29 18.75
CDY48780 Canola nucleus 24.29 18.75
CDY29511 Canola nucleus 15.38 18.72
CDY65899 Canola nucleus 15.38 18.18
CDY02582 Canola nucleus 8.5 17.36
CDY17211 Canola nucleus 26.32 16.67
CDY71075 Canola nucleus 8.1 16.53
CDY69228 Canola nucleus 25.91 16.41
CDY41648 Canola nucleus 11.34 16.37
CDX79549 Canola nucleus 25.51 15.87
CDY43848 Canola nucleus 14.98 14.74
CDY25659 Canola nucleus 14.98 14.74
CDY01007 Canola nucleus 11.34 14.66
CDY40847 Canola nucleus 14.98 14.51
CDY41086 Canola nucleus 15.38 14.23
CDY08539 Canola nucleus 10.93 14.14
CDY31716 Canola nucleus 13.36 14.1
CDY17046 Canola nucleus 14.57 14.06
CDX77191 Canola nucleus 13.36 13.98
CDX95764 Canola nucleus 12.55 13.96
CDX83299 Canola nucleus 12.55 13.72
CDY14103 Canola nucleus 10.53 13.61
CDY04966 Canola nucleus 10.53 13.61
CDX69148 Canola nucleus 14.57 13.58
CDX98862 Canola nucleus 10.53 13.54
CDX70130 Canola nucleus 10.53 13.54
CDX72546 Canola nucleus 14.17 13.41
CDX75511 Canola nucleus 13.77 13.28
CDY29212 Canola nucleus 15.38 12.93
CDY47803 Canola nucleus 15.38 12.58
CDY38144 Canola nucleus 15.38 12.58
CDY40623 Canola nucleus 13.36 12.55
CDY30337 Canola nucleus 15.79 12.34
CDY55370 Canola nucleus 14.98 12.25
CDY33728 Canola nucleus 13.36 12.0
CDY32648 Canola nucleus 8.5 12.0
CDX81686 Canola nucleus 13.77 11.72
CDY24814 Canola nucleus 11.34 11.72
CDY02885 Canola nucleus 8.5 10.55
CDY66658 Canola nucleus 14.17 9.97
CDY51928 Canola nucleus 14.17 9.92
CDX75955 Canola nucleus 13.77 9.71
CDX92182 Canola nucleus 13.77 9.69
CDY33030 Canola nucleus 8.1 9.52
CDX80277 Canola nucleus 8.1 9.52
CDY29211 Canola mitochondrion 5.26 8.72
Protein Annotations
Gene3D:1.10.10.60MapMan:15.5.3.6GO:A0A078JXU8UniProt:A0A078JXU8EnsemblPlants:CDY72488ProteinID:CDY72488
ProteinID:CDY72488.1GO:GO:0003674GO:GO:0003676GO:GO:0003677GO:GO:0005488GO:GO:0005575
GO:GO:0005622GO:GO:0005623GO:GO:0005634GO:GO:0016020GO:GO:0016021EnsemblPlantsGene:GSBRNA2T00030069001
InterPro:Homeobox-like_sfInterPro:Homeobox_domInterPro:IPR001356PFAM:PF00046PFscan:PS50071PANTHER:PTHR24326
PANTHER:PTHR24326:SF185SMART:SM00389SUPFAM:SSF46689TMHMM:TMhelixUniParc:UPI0004EEEB7ASEG:seg
Description
BnaAnng41310DBnaAnng41310D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JXU8]
Coordinates
chrLK051355:-:301..1234
Molecular Weight (calculated)
27576.4 Da
IEP (calculated)
8.686
GRAVY (calculated)
-0.546
Length
247 amino acids
Sequence
(BLAST)
001: MDQEQTQHSP TGHSHSPSSP ASGSTSTETV RSRWSPKPEQ ILILESIFNS GMVNPPKEET VRIRKMLEKF GAVGDANVFY WFQNRRSRSR RRQRQLQAAA
101: AAVTTNTCDQ TMMVNTSLPQ YSGADLGFGG CSTSSNYLYA SSSTSSYGGG YDNHSNNGME NLLAMSGQLG YHEASQHHYQ HHSSNLSPMM CPSDQSSSYD
201: HYQQGKQNSL FACLFLLFKL KCFFLLTLFL SPKSLYNIIK IVKVELN
Best Arabidopsis Sequence Match ( AT3G03660.1 )
(BLAST)
001: MDQEQTPHSP TRHSRSPPSS ASGSTSAEPV RSRWSPKPEQ ILILESIFHS GMVNPPKEET VRIRKMLEKF GAVGDANVFY WFQNRRSRSR RRQRQLQAAA
101: AAADATTNTC DQTMMVSNSL PHHSGSDLGF GGCSTSSNYL FASSSSSYGG GCDNQSNSGM ENLLTMSGQM SYHEATHHHY QNHSSNVTSI LCPSDQNSNF
201: QYQQGAITVF INGVPTEVTR GGIDMKATFG EDLVLVHSSG VPLPTDEFGF LMHSLQHGEA YFLVPRQT
Arabidopsis Description
WOX11WUSCHEL related homeobox 11 [Source:UniProtKB/TrEMBL;Acc:A0A1I9LND8]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.