Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d024410_P001 | Maize | nucleus | 81.16 | 76.19 |
| TraesCS3A01G073500.1 | Wheat | nucleus | 63.77 | 67.69 |
| TraesCS3B01G087800.1 | Wheat | nucleus | 63.41 | 67.05 |
| TraesCS3D01G073300.1 | Wheat | nucleus | 62.68 | 66.28 |
| HORVU3Hr1G013290.3 | Barley | nucleus | 62.32 | 65.9 |
| Os08t0242400-01 | Rice | nucleus | 65.22 | 63.38 |
| HORVU3Hr1G013330.1 | Barley | nucleus | 43.84 | 62.37 |
| GSMUA_Achr10P... | Banana | nucleus | 43.12 | 48.77 |
| VIT_08s0056g01200.t01 | Wine grape | nucleus | 39.13 | 45.76 |
| GSMUA_Achr10P... | Banana | nucleus | 42.39 | 43.98 |
| PGSC0003DMT400069529 | Potato | nucleus | 38.41 | 43.27 |
| KXG39473 | Sorghum | nucleus | 47.83 | 42.04 |
| KRG94925 | Soybean | nucleus | 42.39 | 41.79 |
| Bra036446.1-P | Field mustard | nucleus | 39.49 | 41.13 |
| OQU90491 | Sorghum | nucleus | 38.04 | 40.38 |
| Solyc06g072890.1.1 | Tomato | nucleus | 38.04 | 39.77 |
| AT5G17810.2 | Thale cress | nucleus | 38.41 | 39.55 |
| CDY38461 | Canola | nucleus | 39.13 | 39.42 |
| KRH64971 | Soybean | nucleus | 42.03 | 39.32 |
| CDY21173 | Canola | nucleus | 40.58 | 38.75 |
| CDY29949 | Canola | nucleus | 40.58 | 38.75 |
| GSMUA_Achr6P15910_001 | Banana | nucleus | 44.2 | 38.49 |
| Bra023638.1-P | Field mustard | nucleus | 38.04 | 38.18 |
| Bra002108.1-P | Field mustard | nucleus | 37.68 | 38.1 |
| GSMUA_Achr5P27730_001 | Banana | nucleus | 42.39 | 37.5 |
| CDY16883 | Canola | nucleus | 37.32 | 37.32 |
| CDY02686 | Canola | nucleus | 38.04 | 37.1 |
| CDY66087 | Canola | nucleus | 37.32 | 36.79 |
| AT3G03660.3 | Thale cress | nucleus, plastid | 40.94 | 34.66 |
| Bra031980.1-P | Field mustard | nucleus | 39.49 | 33.85 |
| CDY51756 | Canola | plastid | 39.13 | 33.13 |
| GSMUA_Achr9P05010_001 | Banana | nucleus, plastid | 42.75 | 32.51 |
| CDY72488 | Canola | nucleus, plastid | 28.62 | 31.98 |
| CDY50656 | Canola | nucleus | 39.13 | 31.86 |
| GSMUA_Achr8P01590_001 | Banana | nucleus | 42.75 | 28.1 |
| KXG22537 | Sorghum | plastid | 27.17 | 15.12 |
| OQU87881 | Sorghum | nucleus | 11.59 | 14.68 |
| OQU82902 | Sorghum | nucleus | 13.77 | 14.62 |
| OQU87296 | Sorghum | plastid | 26.45 | 13.7 |
| EES01660 | Sorghum | nucleus | 13.77 | 13.67 |
| OQU82449 | Sorghum | plastid | 11.59 | 13.06 |
| OQU77281 | Sorghum | mitochondrion, nucleus | 12.68 | 12.87 |
| OQU82514 | Sorghum | nucleus | 15.22 | 12.84 |
| OQU87830 | Sorghum | nucleus | 12.68 | 10.29 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.3.6 | UniProt:A0A1B6PGK4 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | InterPro:Homeobox-like_sf |
| InterPro:Homeobox_dom | InterPro:IPR001356 | EnsemblPlants:KXG24798 | ProteinID:KXG24798 | ProteinID:KXG24798.1 | PFAM:PF00046 |
| PFscan:PS50071 | PANTHER:PTHR24326 | PANTHER:PTHR24326:SF202 | SMART:SM00389 | EnsemblPlantsGene:SORBI_3007G087600 | SUPFAM:SSF46689 |
| UniParc:UPI00081AC4C7 | SEG:seg | : | : | : | : |
Description
hypothetical protein
Coordinates
chr7:+:11950504..11952139
Molecular Weight (calculated)
29541.9 Da
IEP (calculated)
8.125
GRAVY (calculated)
-0.304
Length
276 amino acids
Sequence
(BLAST)
(BLAST)
001: MDSHLGQAQA HHRGGEGGEP TTARSRWAPK PEQILILESI FNSGMVNPAK DETARIRRLL ERFGAVRDAN VFYWFQNRRS RSRRRARQLQ QACGAGAAPG
101: QHTTASAAVV AGAGNLHSLN DSVSLFAMHG QSQARNSGMP AVAPMPPAVA SSPHFFGDDV DGGDDLFAIS RQMGLMSRGG DQHRCGYMAN DASQLLSYQP
201: TGTTMTTTTT SSIQVFINGV VYEVPGGGAL LDLAGTFGRD AMLVHSSGEI LPVNENGVLM KSLQMGECYY LVSRST
101: QHTTASAAVV AGAGNLHSLN DSVSLFAMHG QSQARNSGMP AVAPMPPAVA SSPHFFGDDV DGGDDLFAIS RQMGLMSRGG DQHRCGYMAN DASQLLSYQP
201: TGTTMTTTTT SSIQVFINGV VYEVPGGGAL LDLAGTFGRD AMLVHSSGEI LPVNENGVLM KSLQMGECYY LVSRST
001: MNQEGASHSP SSTSTEPVRA RWSPKPEQIL ILESIFNSGT VNPPKDETVR IRKMLEKFGA VGDANVFYWF QNRRSRSRRR HRQLLAATTA AATSIGAEDH
101: QHMTAMSMHQ YPCSNNEIDL GFGSCSNLSA NYFLNGSSSS QIPSFFLGLS SSSGGCENNN GMENLFKMYG HESDHNHQQQ HHSSNAASVL NPSDQNSNSQ
201: YEQEGFMTVF INGVPMEVTK GAIDMKTMFG DDSVLLHSSG LPLPTDEFGF LMHSLQHGQT YFLVPRQT
101: QHMTAMSMHQ YPCSNNEIDL GFGSCSNLSA NYFLNGSSSS QIPSFFLGLS SSSGGCENNN GMENLFKMYG HESDHNHQQQ HHSSNAASVL NPSDQNSNSQ
201: YEQEGFMTVF INGVPMEVTK GAIDMKTMFG DDSVLLHSSG LPLPTDEFGF LMHSLQHGQT YFLVPRQT
Arabidopsis Description
WOX12WUSCHEL-related homeobox 12 [Source:UniProtKB/Swiss-Prot;Acc:Q8GY25]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.