Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 2
| Predictors | GFP | MS/MS | Papers | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU3Hr1G013290.3 | Barley | nucleus | 99.48 | 73.95 |
| TraesCS3B01G087800.1 | Wheat | nucleus | 89.69 | 66.67 |
| TraesCS3A01G073500.1 | Wheat | nucleus | 89.18 | 66.54 |
| TraesCS3D01G073300.1 | Wheat | nucleus | 89.18 | 66.28 |
| KXG24798 | Sorghum | nucleus | 62.37 | 43.84 |
| Os08t0242400-01 | Rice | nucleus | 61.86 | 42.25 |
| Zm00001d024410_P001 | Maize | nucleus | 62.89 | 41.5 |
| GSMUA_Achr10P... | Banana | nucleus | 41.24 | 32.79 |
| HORVU1Hr1G087950.1 | Barley | nucleus | 21.65 | 32.56 |
| VIT_08s0056g01200.t01 | Wine grape | nucleus | 39.18 | 32.2 |
| GSMUA_Achr10P... | Banana | nucleus | 40.21 | 29.32 |
| CDY72488 | Canola | nucleus, plastid | 37.11 | 29.15 |
| PGSC0003DMT400069529 | Potato | nucleus | 35.05 | 27.76 |
| Bra036446.1-P | Field mustard | nucleus | 37.63 | 27.55 |
| KRG94925 | Soybean | nucleus | 39.18 | 27.14 |
| GSMUA_Achr5P27730_001 | Banana | nucleus | 42.78 | 26.6 |
| KRH64971 | Soybean | nucleus | 40.21 | 26.44 |
| CDY38461 | Canola | nucleus | 37.11 | 26.28 |
| Solyc06g072890.1.1 | Tomato | nucleus | 35.57 | 26.14 |
| CDY16883 | Canola | nucleus | 37.11 | 26.09 |
| Bra002108.1-P | Field mustard | nucleus | 36.6 | 26.01 |
| CDY29949 | Canola | nucleus | 38.14 | 25.61 |
| CDY21173 | Canola | nucleus | 38.14 | 25.61 |
| AT5G17810.2 | Thale cress | nucleus | 35.05 | 25.37 |
| GSMUA_Achr6P15910_001 | Banana | nucleus | 41.24 | 25.24 |
| HORVU4Hr1G051530.5 | Barley | nucleus | 44.85 | 25.22 |
| Bra023638.1-P | Field mustard | nucleus | 34.54 | 24.36 |
| CDY02686 | Canola | nucleus | 35.05 | 24.03 |
| CDY66087 | Canola | nucleus | 34.54 | 23.93 |
| Bra031980.1-P | Field mustard | nucleus | 37.63 | 22.67 |
| GSMUA_Achr9P05010_001 | Banana | nucleus, plastid | 42.27 | 22.59 |
| CDY51756 | Canola | plastid | 37.63 | 22.39 |
| HORVU3Hr1G080690.1 | Barley | nucleus | 14.95 | 22.31 |
| AT3G03660.3 | Thale cress | nucleus, plastid | 37.11 | 22.09 |
| CDY50656 | Canola | nucleus | 36.6 | 20.94 |
| GSMUA_Achr8P01590_001 | Banana | nucleus | 43.81 | 20.24 |
| HORVU5Hr1G049190.2 | Barley | nucleus | 15.46 | 16.13 |
| HORVU3Hr1G080660.5 | Barley | nucleus | 19.59 | 14.18 |
| HORVU3Hr1G085050.3 | Barley | nucleus | 13.4 | 12.38 |
| HORVU1Hr1G010580.2 | Barley | nucleus, plastid | 17.53 | 12.1 |
| HORVU3Hr1G086450.1 | Barley | nucleus, plastid | 15.46 | 10.95 |
| HORVU3Hr1G060950.1 | Barley | nucleus, plastid | 26.8 | 10.08 |
| HORVU5Hr1G022120.1 | Barley | nucleus | 13.4 | 9.42 |
| HORVU3Hr1G086430.1 | Barley | nucleus | 12.37 | 8.48 |
| HORVU1Hr1G087940.1 | Barley | cytosol, plasma membrane, plastid | 9.28 | 7.23 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.3.6 | UniProt:A0A287K575 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | EnsemblPlantsGene:HORVU3Hr1G013330 |
| EnsemblPlants:HORVU3Hr1G013330.1 | InterPro:Homeobox-like_sf | InterPro:Homeobox_dom | InterPro:IPR001356 | PFAM:PF00046 | PFscan:PS50071 |
| PANTHER:PTHR24326 | PANTHER:PTHR24326:SF202 | SMART:SM00389 | SUPFAM:SSF46689 | UniParc:UPI000B475EC1 | SEG:seg |
Description
No Description!
Coordinates
chrchr3H:-:28785048..28786156
Molecular Weight (calculated)
21034.5 Da
IEP (calculated)
8.705
GRAVY (calculated)
-0.662
Length
194 amino acids
Sequence
(BLAST)
(BLAST)
001: EQHHHGQAPT PTHRGGRSSE GGEPTTTRSR WAPKPEQILI LESIFNSGMV NPAKDETARI RLLLERFGAV RDANVFYWFQ NRRSRSRRRA RQLQQSCGGT
101: GDADQLPSNA VLAGHGYHGI GTSPYNAMQY GQLCGGVPAA AVTAAPHFLV DDADSGDDLF AIPRQMGLMA RGGESQHSYT ATDASQLSYQ ATGK
101: GDADQLPSNA VLAGHGYHGI GTSPYNAMQY GQLCGGVPAA AVTAAPHFLV DDADSGDDLF AIPRQMGLMA RGGESQHSYT ATDASQLSYQ ATGK
001: MNQEGASHSP SSTSTEPVRA RWSPKPEQIL ILESIFNSGT VNPPKDETVR IRKMLEKFGA VGDANVFYWF QNRRSRSRRR HRQLLAATTA AATSIGAEDH
101: QHMTAMSMHQ YPCSNNEIDL GFGSCSNLSA NYFLNGSSSS QIPSFFLGLS SSSGGCENNN GMENLFKMYG HESDHNHQQQ HHSSNAASVL NPSDQNSNSQ
201: YEQGFMTVFI NGVPMEVTKG AIDMKTMFGD DSVLLHSSGL PLPTDEFGFL MHSLQHGQTY FLVPRQT
101: QHMTAMSMHQ YPCSNNEIDL GFGSCSNLSA NYFLNGSSSS QIPSFFLGLS SSSGGCENNN GMENLFKMYG HESDHNHQQQ HHSSNAASVL NPSDQNSNSQ
201: YEQGFMTVFI NGVPMEVTKG AIDMKTMFGD DSVLLHSSGL PLPTDEFGFL MHSLQHGQTY FLVPRQT
Arabidopsis Description
WOX12WUSCHEL-related homeobox 12 [Source:UniProtKB/Swiss-Prot;Acc:Q8GY25]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.