Factsheet for HORVU3Hr1G086430.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3B01G391200.1	Wheat	nucleus	84.45	82.41
TraesCS3D01G352700.1	Wheat	nucleus	84.45	82.13
TraesCS3A01G358400.1	Wheat	nucleus	83.39	81.38
HORVU3Hr1G086450.1	Barley	nucleus, plastid	69.26	71.53
Os01t0840300-00	Rice	cytosol, mitochondrion, nucleus	15.19	66.15
HORVU5Hr1G022120.1	Barley	nucleus	43.82	44.93
Zm00001d042920_P001	Maize	nucleus	33.22	29.01
OQU87830	Sorghum	nucleus	32.86	27.35
Zm00001d012419_P001	Maize	nucleus	32.86	27.11
HORVU5Hr1G049190.2	Barley	nucleus	16.61	25.27
HORVU1Hr1G087950.1	Barley	nucleus	9.54	20.93
HORVU3Hr1G080690.1	Barley	nucleus	9.19	20.0
HORVU3Hr1G085050.3	Barley	nucleus	13.43	18.1
HORVU1Hr1G010580.2	Barley	nucleus, plastid	17.67	17.79
HORVU3Hr1G013330.1	Barley	nucleus	8.48	12.37
HORVU3Hr1G080660.5	Barley	nucleus	11.66	12.31
HORVU3Hr1G013290.3	Barley	nucleus	9.54	10.34
HORVU1Hr1G087940.1	Barley	cytosol, plasma membrane, plastid	8.13	9.24
HORVU4Hr1G051530.5	Barley	nucleus	10.6	8.7
HORVU3Hr1G060950.1	Barley	nucleus, plastid	14.13	7.75

Protein Annotations

EnsemblPlants:HORVU3Hr1G086430.1	EnsemblPlantsGene:HORVU3Hr1G086430	Gene3D:1.10.10.60	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	InterPro:Homeobox-like_sf
InterPro:Homeobox_dom	InterPro:IPR001356	PANTHER:PTHR24326	PANTHER:PTHR24326:SF203	PFAM:PF00046	PFscan:PS50071
SEG:seg	SUPFAM:SSF46689	UniParc:UPI000295B882	UniProt:M0XTJ6	MapMan:15.5.3.6	:

Description

No Description!

Coordinates

chrchr3H:-:616993938..616996482

Molecular Weight (calculated)

31608.2 Da

IEP (calculated)

9.754

GRAVY (calculated)

-0.759

Length

283 amino acids

Sequence
(BLAST)

001: MESIDHHDEA ATRLSLSPPH PSAPLSQPRW VPTREQLAVL DGLYRQGMRT PTAEEIHQVT ARLQEHGPIE GKNVFHWFQN QMVQLRQMEK QQRSDYFARQ
101: FRRPQPLPVL HSPPGHPFSP FQLQAPPAPN TPACNGEATY MQQPCYMSGP ATQAAANPTY YSQMQPPIMY PSAETMAHGN AQAQAQAQAQ AAMYYQAASP
201: NNSNTQQTHA LQLPPTAGSY GARNAYSNRP VLLNLFPQYP TFANRKKTRR VRSVGSARPS TSGSISWETE SPKIPNRQIV VDL

Best Arabidopsis Sequence Match ( AT5G59340.1 )
(BLAST)

001: MENEVNAGTA SSSRWNPTKD QITLLENLYK EGIRTPSADQ IQQITGRLRA YGHIEGKNVF YWFQNHKARQ RQKQKQERMA YFNRLLHKTS RFFYPPPCSN
101: VGCVSPYYLQ QASDHHMNQH GSVYTNDLLH RNNVMIPSGG YEKRTVTQHQ KQLSDIRTTA ATRMPISPSS LRFDRFALRD NCYAGEDINV NSSGRKTLPL
201: FPLQPLNASN ADGMGSSSFA LGSDSPVDCS SDGAGREQPF IDFFSGGSTS TRFDSNGNGL

Arabidopsis Description

WOX2WUSCHEL-related homeobox 2 [Source:UniProtKB/Swiss-Prot;Acc:Q6X7K1]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.