Factsheet for HORVU3Hr1G060950.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid, nucleus

Predictor Summary:

plastid 2
mitochondrion 2
nucleus 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus, plastid
Any Predictor:	mitochondrion, nucleus, plastid
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	nucleus
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3D01G244300.1	Wheat	nucleus, plastid	91.47	92.01
TraesCS3B01G272200.1	Wheat	nucleus, plastid	91.67	91.84
TraesCS3A01G247200.1	Wheat	nucleus, plastid	91.47	91.65
Os07t0533201-00	Rice	mitochondrion, nucleus, peroxisome	10.47	83.08
HORVU1Hr1G087950.1	Barley	nucleus	13.37	53.49
OQU87296	Sorghum	plastid	53.88	52.16
Os01t0667400-02	Rice	plastid	40.12	38.84
KRH30862	Soybean	nucleus	27.13	35.0
KRH32713	Soybean	nucleus	27.33	34.99
Solyc02g077390.1.1	Tomato	nucleus	23.84	34.36
GSMUA_Achr9P06660_001	Banana	nucleus	25.39	33.85
CDX87744	Canola	nucleus	20.93	33.75
VIT_10s0003g00560.t01	Wine grape	nucleus	26.74	33.5
Bra022008.1-P	Field mustard	nucleus	19.96	33.44
CDY48780	Canola	nucleus	20.74	33.44
KRH50138	Soybean	nucleus	25.0	33.25
AT5G45980.1	Thale cress	nucleus	20.54	32.62
PGSC0003DMT400027850	Potato	nucleus	20.93	32.43
KRH20358	Soybean	nucleus	24.42	32.39
GSMUA_Achr8P27170_001	Banana	nucleus	25.78	29.75
HORVU3Hr1G013290.3	Barley	nucleus	14.15	27.97
HORVU3Hr1G013330.1	Barley	nucleus	10.08	26.8
HORVU5Hr1G049190.2	Barley	nucleus	7.36	20.43
HORVU3Hr1G080690.1	Barley	nucleus	5.04	20.0
HORVU3Hr1G085050.3	Barley	nucleus	7.36	18.1
HORVU1Hr1G087940.1	Barley	cytosol, plasma membrane, plastid	8.72	18.07
HORVU4Hr1G051530.5	Barley	nucleus	11.63	17.39
HORVU3Hr1G086450.1	Barley	nucleus, plastid	8.53	16.06
HORVU5Hr1G022120.1	Barley	nucleus	8.33	15.58
HORVU1Hr1G010580.2	Barley	nucleus, plastid	8.14	14.95
HORVU3Hr1G080660.5	Barley	nucleus	7.36	14.18
HORVU3Hr1G086430.1	Barley	nucleus	7.75	14.13

Protein Annotations

Gene3D:1.10.10.60	MapMan:15.5.3.6	UniProt:A0A287L9L2	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	EnsemblPlantsGene:HORVU3Hr1G060950
EnsemblPlants:HORVU3Hr1G060950.1	InterPro:Homeobox-like_sf	InterPro:Homeobox_dom	InterPro:IPR001356	PFAM:PF00046	PFscan:PS50071
PANTHER:PTHR24326	PANTHER:PTHR24326:SF308	SMART:SM00389	SUPFAM:SSF46689	UniParc:UPI000B471139	SEG:seg

Description

No Description!

Coordinates

chrchr3H:+:464417446..464421050

Molecular Weight (calculated)

53784.2 Da

IEP (calculated)

8.006

GRAVY (calculated)

-0.221

Length

516 amino acids

Sequence
(BLAST)

001: MASPNSRQQQ QHWPSMFRSK HGSQVWQSQP DMTGSPPSLV SGSAAAAGHS FKSPFSSGPD QERNTDTKPR WNPRPEQIRV LETLFNSGLI NPTRDEIPRI
101: RMRLQEYGPV GDSNVFYWFQ NRKSRSKNKL RNAAARAAPV RACAPARQHA AAPYTPPPKQ FHPPKPPLFS PVAPTSSSSS SSDRSSGSSK PLKPAATQAM
201: SATAAMDLLS PLAAACHQQM DYQFSLGQPA PSAPVPAPNL DEFVATDVEP IFLQYPQGHC LSAGELAAIL GAQYIPVPAE QQPPVASPAG MLFGLCNDVA
301: PIGPTTTGQR SSASAAGLGQ YWPSGVDQLG LRKNSDPFLN TSVAKEEAYE DFTKTKLGLL QYGLGVTAAP AVNAASAAGV LPLPASPDSA AVTVASASST
401: AGRLTSLFAT TTTTEAVSYN SNLQGPAGDV GFAGAAAGPG ATGTGVLGRG AAVVCFAGTS AACSVPATHL DVKLYFGDGA VLFRCNGERA EPLLVDDAGL
501: TVEPLQHGGV YYCVLI

Best Arabidopsis Sequence Match ( AT2G33880.1 )
(BLAST)

001: MASSNRHWPS MFKSKPHPHQ WQHDINSPLL PSASHRSSPF SSGCEVERSP EPKPRWNPKP EQIRILEAIF NSGMVNPPRE EIRRIRAQLQ EYGQVGDANV
101: FYWFQNRKSR SKHKLRLLHN HSKHSLPQTQ PQPQPQPSAS SSSSSSSSSS KSTKPRKSKN KNNTNLSLGG SQMMGMFPPE PAFLFPVSTV GGFEGITVSS
201: QLGFLSGDMI EQQKPAPTCT GLLLSEIMNG SVSYGTHHQQ HLSEKEVEEM RMKMLQQPQT QICYATTNHQ IASYNNNNNN NNIMLHIPPT TSTATTITTS
301: HSLATVPSTS DQLQVQADAR IRVFINEMEL EVSSGPFNVR DAFGEEVVLI NSAGQPIVTD EYGVALHPLQ HGASYYLI

Arabidopsis Description

WOX9WOX9A [Source:UniProtKB/TrEMBL;Acc:A0A178VQA8]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.