Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
| Predictors | GFP | MS/MS | Papers | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3D01G335500.1 | Wheat | nucleus | 90.67 | 92.4 |
| TraesCSU01G204800.1 | Wheat | nucleus | 52.61 | 90.38 |
| TraesCS3B01G373800.1 | Wheat | nucleus | 87.69 | 90.04 |
| TraesCS3A01G341700.1 | Wheat | nucleus | 88.06 | 89.06 |
| Os01t0818400-01 | Rice | nucleus | 76.49 | 76.78 |
| EES01660 | Sorghum | nucleus | 71.64 | 69.06 |
| Zm00001d043076_P001 | Maize | nucleus | 70.15 | 68.86 |
| HORVU3Hr1G080690.1 | Barley | nucleus | 33.21 | 68.46 |
| Zm00001d012516_P001 | Maize | nucleus | 67.54 | 64.18 |
| GSMUA_Achr4P25530_001 | Banana | nucleus | 44.78 | 56.87 |
| Bra012245.1-P | Field mustard | nucleus | 26.49 | 53.38 |
| CDY01358 | Canola | nucleus | 26.49 | 53.38 |
| AT1G20710.1 | Thale cress | nucleus | 31.34 | 42.64 |
| CDX93197 | Canola | nucleus | 30.22 | 41.54 |
| CDY31870 | Canola | nucleus | 30.22 | 41.54 |
| Bra025839.1-P | Field mustard | nucleus | 31.34 | 41.38 |
| CDY29511 | Canola | nucleus | 31.34 | 41.38 |
| CDY65899 | Canola | nucleus | 31.72 | 40.67 |
| AT1G20700.1 | Thale cress | nucleus | 31.72 | 40.28 |
| HORVU1Hr1G087950.1 | Barley | nucleus | 11.19 | 23.26 |
| HORVU3Hr1G013330.1 | Barley | nucleus | 14.18 | 19.59 |
| HORVU5Hr1G049190.2 | Barley | nucleus | 11.19 | 16.13 |
| HORVU3Hr1G013290.3 | Barley | nucleus | 15.67 | 16.09 |
| HORVU3Hr1G085050.3 | Barley | nucleus | 11.57 | 14.76 |
| HORVU1Hr1G010580.2 | Barley | nucleus, plastid | 14.18 | 13.52 |
| HORVU3Hr1G086450.1 | Barley | nucleus, plastid | 12.31 | 12.04 |
| HORVU3Hr1G086430.1 | Barley | nucleus | 12.31 | 11.66 |
| HORVU4Hr1G051530.5 | Barley | nucleus | 14.55 | 11.3 |
| HORVU5Hr1G022120.1 | Barley | nucleus | 10.82 | 10.51 |
| HORVU1Hr1G087940.1 | Barley | cytosol, plasma membrane, plastid | 8.96 | 9.64 |
| HORVU3Hr1G060950.1 | Barley | nucleus, plastid | 14.18 | 7.36 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.3.6 | UniProt:A0A287LWF2 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | EnsemblPlantsGene:HORVU3Hr1G080660 |
| EnsemblPlants:HORVU3Hr1G080660.5 | InterPro:Homeobox-like_sf | InterPro:Homeobox_dom | InterPro:IPR001356 | PFAM:PF00046 | PFscan:PS50071 |
| PANTHER:PTHR24326 | PANTHER:PTHR24326:SF340 | SMART:SM00389 | SUPFAM:SSF46689 | UniParc:UPI000B4689D9 | SEG:seg |
Description
No Description!
Coordinates
chrchr3H:-:589830868..589833551
Molecular Weight (calculated)
29970.1 Da
IEP (calculated)
7.758
GRAVY (calculated)
-0.831
Length
268 amino acids
Sequence
(BLAST)
(BLAST)
001: MEWDKASAAA AAAAAGETAE ERGGAGDALG YVKVMTDEQM EVLRKQISIY ATICEQLVEM HRALTAHQDS IAGMRLGNLY CDPLMVHGGH KITARQRWTP
101: TQMQLQILES IFDQGNGTPS KQKIKDITAE LSQHGQISET NVYNWFQNRR ARSKRKQAAS SLPNNAESEA EGDEESPTDK KPRSDGSQQQ SMAMRAHNPD
201: RISEMHRHFD AAEREQVRGP MYGSSNDSGA RSSGGLGQMS FYENVISNPS MFRKQHLFSR QYKTRFLQ
101: TQMQLQILES IFDQGNGTPS KQKIKDITAE LSQHGQISET NVYNWFQNRR ARSKRKQAAS SLPNNAESEA EGDEESPTDK KPRSDGSQQQ SMAMRAHNPD
201: RISEMHRHFD AAEREQVRGP MYGSSNDSGA RSSGGLGQMS FYENVISNPS MFRKQHLFSR QYKTRFLQ
001: MMEWDNQLQP NNHHSSNLQG IDVNGGSGAG GGMYVKVMTD EQYETLRKQI AIYGTICERL VEMHKTLTAQ QDLAGGRMGG LYADPMMSSL GHKMTARQRW
101: TPTPVQLQIL ERIFDQGTGT PSKQKIKDIT EELSQHGQIA EQNVYNWFQN RRARSKRKQH GGGSSGNNNG ESEVETEVEA LNEKRVVRPE SLLGLPDGNS
201: NNNGLGTTTA TTTAPRPEDL CFQSPEISSD LHLLDVLSNP RDEHLVGKMG LAESYNLYDH VEDYGMSG
101: TPTPVQLQIL ERIFDQGTGT PSKQKIKDIT EELSQHGQIA EQNVYNWFQN RRARSKRKQH GGGSSGNNNG ESEVETEVEA LNEKRVVRPE SLLGLPDGNS
201: NNNGLGTTTA TTTAPRPEDL CFQSPEISSD LHLLDVLSNP RDEHLVGKMG LAESYNLYDH VEDYGMSG
Arabidopsis Description
WOX13WOX13 [Source:UniProtKB/TrEMBL;Acc:A0A178UZQ1]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.