Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d043076_P001 | Maize | nucleus | 82.98 | 85.71 |
| Os01t0818400-01 | Rice | nucleus | 69.86 | 73.78 |
| TraesCS3B01G373800.1 | Wheat | nucleus | 64.54 | 69.73 |
| TraesCS3A01G341700.1 | Wheat | nucleus | 64.89 | 69.06 |
| HORVU3Hr1G080660.5 | Barley | nucleus | 64.18 | 67.54 |
| TraesCSU01G204800.1 | Wheat | nucleus | 37.23 | 67.31 |
| TraesCS3D01G335500.1 | Wheat | nucleus | 62.41 | 66.92 |
| HORVU3Hr1G080690.1 | Barley | nucleus | 28.01 | 60.77 |
| VIT_04s0044g00150.t01 | Wine grape | nucleus | 48.23 | 56.9 |
| KRH60910 | Soybean | nucleus | 41.84 | 56.73 |
| VIT_04s0044g00160.t01 | Wine grape | nucleus | 46.81 | 55.93 |
| VIT_18s0122g01140.t01 | Wine grape | nucleus | 55.32 | 55.91 |
| GSMUA_Achr4P25530_001 | Banana | nucleus | 41.13 | 54.98 |
| KRH51590 | Soybean | nucleus | 41.49 | 53.42 |
| Bra012245.1-P | Field mustard | nucleus | 24.82 | 52.63 |
| CDY01358 | Canola | nucleus | 24.82 | 52.63 |
| Solyc02g082670.2.1 | Tomato | nucleus | 49.65 | 51.09 |
| PGSC0003DMT400003980 | Potato | nucleus | 48.58 | 49.82 |
| KRH01611 | Soybean | nucleus | 45.74 | 48.5 |
| KRH70496 | Soybean | nucleus | 43.62 | 46.95 |
| KRH36192 | Soybean | nucleus | 45.39 | 45.55 |
| KRG90565 | Soybean | nucleus | 43.97 | 43.66 |
| CDY31870 | Canola | nucleus | 28.72 | 41.54 |
| CDX93197 | Canola | nucleus | 28.72 | 41.54 |
| AT1G20710.1 | Thale cress | nucleus | 28.01 | 40.1 |
| CDY29511 | Canola | nucleus | 28.72 | 39.9 |
| Bra025839.1-P | Field mustard | nucleus | 28.72 | 39.9 |
| AT1G20700.1 | Thale cress | nucleus | 29.43 | 39.34 |
| CDY65899 | Canola | nucleus | 29.08 | 39.23 |
| Zm00001d037309_P001 | Maize | nucleus | 7.8 | 17.46 |
| Zm00001d022524_P001 | Maize | nucleus | 14.54 | 15.83 |
| Zm00001d010998_P001 | Maize | nucleus | 12.06 | 15.45 |
| Zm00001d042821_P001 | Maize | nucleus | 12.06 | 15.38 |
| Zm00001d012330_P001 | Maize | nucleus | 12.41 | 14.89 |
| Zm00001d035535_P001 | Maize | nucleus | 13.12 | 14.34 |
| Zm00001d026453_P001 | Maize | plastid | 12.06 | 13.6 |
| Zm00001d001948_P001 | Maize | nucleus, plastid | 14.89 | 13.12 |
| Zm00001d024410_P001 | Maize | nucleus | 13.48 | 12.93 |
| Zm00001d047559_P001 | Maize | nucleus | 14.18 | 12.7 |
| Zm00001d028986_P001 | Maize | nucleus | 14.18 | 12.38 |
| Zm00001d004889_P001 | Maize | nucleus | 11.35 | 12.21 |
| Zm00001d052598_P001 | Maize | nucleus | 11.35 | 12.08 |
| Zm00001d026537_P001 | Maize | plastid | 13.48 | 11.69 |
| Zm00001d012419_P001 | Maize | nucleus | 12.77 | 10.5 |
| Zm00001d042920_P001 | Maize | nucleus | 12.06 | 10.49 |
| Zm00001d039017_P001 | Maize | nucleus | 15.25 | 8.72 |
Protein Annotations
| Gene3D:1.10.10.60 | EntrezGene:103636556 | MapMan:15.5.3.6 | ProteinID:AQK99703.1 | UniProt:B4FIK7 | EMBL:BT036945 |
| EMBL:EU952747 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | InterPro:Homeobox-like_sf | InterPro:Homeobox_dom | InterPro:IPR001356 |
| PFAM:PF00046 | PFscan:PS50071 | PANTHER:PTHR24326 | PANTHER:PTHR24326:SF340 | SMART:SM00389 | SUPFAM:SSF46689 |
| UniParc:UPI00017B6990 | EnsemblPlantsGene:Zm00001d012516 | EnsemblPlants:Zm00001d012516_P001 | EnsemblPlants:Zm00001d012516_T001 | SEG:seg | : |
Description
WUSCHEL-related homeobox transcription factor 13bWUSCHEL-related homeobox 13
Coordinates
chr8:-:175931640..175934827
Molecular Weight (calculated)
30978.4 Da
IEP (calculated)
6.957
GRAVY (calculated)
-0.743
Length
282 amino acids
Sequence
(BLAST)
(BLAST)
001: MDWGNRTKAA AAAAAPDERA GGGEGLGGYV KVMTDEQMEV LRKQISIYAT ICEQLVEMHR VLTEHQDTIA GLRFSNLYCD PLIIPGGHKI TARQRWQPTP
101: MQLQILESIF DQGNGTPSKQ KIKEITAELS QHGQISETNV YNWFQNRRAR SKRKQAAASL PNNAESEAEA DEEPLADKKP KSDRPPPPPP PIQDNTKATG
201: ALSADRVSGG TRHLDTGHDQ TSGVMYGCND SGLLRSSGSS GQMSLYENFM SNPRIDRFPA KVESSRSFPH LQQHGEGFGM FG
101: MQLQILESIF DQGNGTPSKQ KIKEITAELS QHGQISETNV YNWFQNRRAR SKRKQAAASL PNNAESEAEA DEEPLADKKP KSDRPPPPPP PIQDNTKATG
201: ALSADRVSGG TRHLDTGHDQ TSGVMYGCND SGLLRSSGSS GQMSLYENFM SNPRIDRFPA KVESSRSFPH LQQHGEGFGM FG
001: MMEWDNQLQP NNHHSSNLQG IDVNGGSGAG GGMYVKVMTD EQYETLRKQI AIYGTICERL VEMHKTLTAQ QDLAGGRMGG LYADPMMSSL GHKMTARQRW
101: TPTPVQLQIL ERIFDQGTGT PSKQKIKDIT EELSQHGQIA EQNVYNWFQN RRARSKRKQH GGGSSGNNNG ESEVETEVEA LNEKRVVRPE SLLGLPDGNS
201: NNNGLGTTTA TTTAPRPEDL CFQSPEISSD LHLLDVLSNP RDEHLVGKMG LAESYNLYDH VEDYGMSG
101: TPTPVQLQIL ERIFDQGTGT PSKQKIKDIT EELSQHGQIA EQNVYNWFQN RRARSKRKQH GGGSSGNNNG ESEVETEVEA LNEKRVVRPE SLLGLPDGNS
201: NNNGLGTTTA TTTAPRPEDL CFQSPEISSD LHLLDVLSNP RDEHLVGKMG LAESYNLYDH VEDYGMSG
Arabidopsis Description
WOX13WOX13 [Source:UniProtKB/TrEMBL;Acc:A0A178UZQ1]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.