Factsheet for Zm00001d026537_P001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 5
nucleus 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	nucleus, plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	nucleus
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
OQU82514	Sorghum	nucleus	76.92	76.45
Zm00001d001948_P001	Maize	nucleus, plastid	74.15	75.31
Zm00001d037309_P001	Maize	nucleus	21.54	55.56
Os04t0663600-01	Rice	nucleus	46.77	52.6
TraesCS2A01G491900.1	Wheat	mitochondrion, plastid	39.69	41.88
Zm00001d042821_P001	Maize	nucleus	18.15	26.7
Zm00001d010998_P001	Maize	nucleus	16.92	25.0
Zm00001d012330_P001	Maize	nucleus	17.85	24.68
Zm00001d035535_P001	Maize	nucleus	17.54	22.09
Zm00001d026453_P001	Maize	plastid	16.31	21.2
Zm00001d004889_P001	Maize	nucleus	16.92	20.99
Zm00001d052598_P001	Maize	nucleus	16.92	20.75
Zm00001d042920_P001	Maize	nucleus	18.46	18.52
Zm00001d012419_P001	Maize	nucleus	17.85	16.91
Zm00001d022524_P001	Maize	nucleus	12.62	15.83
Zm00001d047559_P001	Maize	nucleus	14.15	14.6
Zm00001d028986_P001	Maize	nucleus	13.85	13.93
Zm00001d024410_P001	Maize	nucleus	12.31	13.61
Zm00001d012516_P001	Maize	nucleus	11.69	13.48
Zm00001d043076_P001	Maize	nucleus	10.77	12.82
Zm00001d039017_P001	Maize	nucleus	12.31	8.11

Protein Annotations

Gene3D:1.10.10.60	EntrezGene:100037787	MapMan:15.5.3.6	UniProt:A0AAS6	EMBL:AM234745	ProteinID:AQK46978.1
GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	InterPro:Homeobox-like_sf	InterPro:Homeobox_dom	InterPro:IPR001356	PFAM:PF00046
PFscan:PS50071	PANTHER:PTHR24326	PANTHER:PTHR24326:SF123	SMART:SM00389	SUPFAM:SSF46689	UniParc:UPI0000E5D70A
EnsemblPlantsGene:Zm00001d026537	EnsemblPlants:Zm00001d026537_P001	EnsemblPlants:Zm00001d026537_T001	SEG:seg	:	:

Description

Homeobox-transcription factor 122Putative homeobox DNA-binding domain superfamily protein%3B WUS2 protein

Coordinates

chr10:-:147855536..147856873

Molecular Weight (calculated)

33173.3 Da

IEP (calculated)

5.660

GRAVY (calculated)

-0.293

Length

325 amino acids

Sequence
(BLAST)

001: MAANAGGGGA GGGSGSGSVA APAVCRPSGS RWTPTPEQIR MLKELYYGCG IRSPSSEQIQ RITAMLRQHG KIEGKNVFYW FQNHKARERQ KRRLTSLDVN
101: VPAAGAADAT TSQLGVLSLS SPPSGAAPPS PTLGFYAAGN GGGSAGLLDT SSDWGSSGAA MATETCFLQD YMGVTDTGSS SQWPCFSSSD TIMAAAAAAA
201: RVATTRAPET LPLFPTCGDD DDDDSQPPPR PRHAVPVPAG ETIRGGGGSS SSYLPFWGAG AASTTAGATS SVAIQQQHQL QEQYSFYSNS TQLAGTGSQD
301: VSASAAALEL SLSSWCSPYP AAGSM

Best Arabidopsis Sequence Match ( AT2G17950.1 )
(BLAST)

001: MEPPQHQHHH HQADQESGNN NNNKSGSGGY TCRQTSTRWT PTTEQIKILK ELYYNNAIRS PTADQIQKIT ARLRQFGKIE GKNVFYWFQN HKARERQKKR
101: FNGTNMTTPS SSPNSVMMAA NDHYHPLLHH HHGVPMQRPA NSVNVKLNQD HHLYHHNKPY PSFNNGNLNH ASSGTECGVV NASNGYMSSH VYGSMEQDCS
201: MNYNNVGGGW ANMDHHYSSA PYNFFDRAKP LFGLEGHQEE EECGGDAYLE HRRTLPLFPM HGEDHINGGS GAIWKYGQSE VRPCASLELR LN

Arabidopsis Description

WUSProtein WUSCHEL [Source:UniProtKB/Swiss-Prot;Acc:Q9SB92]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.