Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 2
- mitochondrion 2
- nucleus 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os05t0564500-00 | Rice | mitochondrion, nucleus, peroxisome | 12.58 | 95.38 |
| KXG22537 | Sorghum | plastid | 83.98 | 83.47 |
| HORVU1Hr1G087950.1 | Barley | nucleus | 12.78 | 48.84 |
| PGSC0003DMT400027850 | Potato | nucleus | 25.15 | 37.24 |
| Solyc02g077390.1.1 | Tomato | nucleus | 25.96 | 35.75 |
| GSMUA_Achr9P06660_001 | Banana | nucleus | 27.79 | 35.4 |
| KRH20358 | Soybean | nucleus | 27.38 | 34.7 |
| TraesCS1D01G406900.1 | Wheat | nucleus | 34.08 | 34.57 |
| KRH50138 | Soybean | nucleus | 26.98 | 34.28 |
| Bra022008.1-P | Field mustard | nucleus | 21.1 | 33.77 |
| TraesCS1A01G399400.1 | Wheat | nucleus | 33.27 | 33.74 |
| VIT_10s0003g00560.t01 | Wine grape | nucleus | 27.59 | 33.01 |
| TraesCS1B01G427400.1 | Wheat | nucleus, plastid | 32.45 | 32.99 |
| KRH30862 | Soybean | nucleus | 26.57 | 32.75 |
| AT5G45980.1 | Thale cress | nucleus | 21.3 | 32.31 |
| CDX87744 | Canola | nucleus | 20.89 | 32.19 |
| KRH32713 | Soybean | nucleus | 26.17 | 32.01 |
| CDY48780 | Canola | nucleus | 20.69 | 31.88 |
| Zm00001d022524_P001 | Maize | nucleus | 16.23 | 30.89 |
| GSMUA_Achr8P27170_001 | Banana | nucleus | 27.59 | 30.43 |
| Zm00001d047559_P001 | Maize | nucleus | 17.24 | 26.98 |
| Zm00001d024410_P001 | Maize | nucleus | 15.42 | 25.85 |
| Zm00001d028986_P001 | Maize | nucleus | 16.63 | 25.39 |
| Zm00001d037309_P001 | Maize | nucleus | 4.87 | 19.05 |
| Zm00001d010998_P001 | Maize | nucleus | 7.71 | 17.27 |
| Zm00001d012330_P001 | Maize | nucleus | 8.11 | 17.02 |
| Zm00001d035535_P001 | Maize | nucleus | 8.72 | 16.67 |
| Zm00001d042821_P001 | Maize | nucleus | 7.3 | 16.29 |
| Zm00001d004889_P001 | Maize | nucleus | 8.11 | 15.27 |
| Zm00001d012516_P001 | Maize | nucleus | 8.72 | 15.25 |
| Zm00001d043076_P001 | Maize | nucleus | 8.11 | 14.65 |
| Zm00001d052598_P001 | Maize | nucleus | 7.71 | 14.34 |
| Zm00001d026453_P001 | Maize | plastid | 7.1 | 14.0 |
| Zm00001d001948_P001 | Maize | nucleus, plastid | 8.72 | 13.44 |
| Zm00001d042920_P001 | Maize | nucleus | 8.32 | 12.65 |
| Zm00001d026537_P001 | Maize | plastid | 8.11 | 12.31 |
| Zm00001d012419_P001 | Maize | nucleus | 7.71 | 11.08 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.3.6 | UniProt:A0A1D6MCW8 | ProteinID:AQK88529.1 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| InterPro:Homeobox-like_sf | InterPro:Homeobox_dom | InterPro:IPR001356 | PFAM:PF00046 | PFscan:PS50071 | PANTHER:PTHR24326 |
| PANTHER:PTHR24326:SF308 | SMART:SM00389 | SUPFAM:SSF46689 | UniParc:UPI000843CBF5 | EnsemblPlantsGene:Zm00001d039017 | EnsemblPlants:Zm00001d039017_P001 |
| EnsemblPlants:Zm00001d039017_T001 | SEG:seg | : | : | : | : |
Description
WUSCHEL related homeobox 9c WUSCHEL related homeobox 9c
Coordinates
chr6:+:168767482..168771320
Molecular Weight (calculated)
51903.3 Da
IEP (calculated)
7.341
GRAVY (calculated)
-0.224
Length
493 amino acids
Sequence
(BLAST)
(BLAST)
001: MYRSSLACNF QQPQPQPDMN NGGKSSLMSS RCEENGGRNP EPRPRWNPRP EQIRILEGIF NSGMVNPPRD EIRRIRLQLQ EYGPVGDANV FYWFQNRKSR
101: TKHKLRAAGQ LQPSGSGRSA LQARACAPAP VTPPRNLQLA AAAPVAPPTS SSSSSSDRSS GSSSSKSVTV TPTTAVALAS PAGAAPAAVF RQQGVMPTTA
201: MDLLTPLPSS SAALAARQLY YQYHSQIMAP AAPPMPDTVI ASPEQFLPQW QQGGQQHYYL PATELGGVLD GHSHHTHEPP AAIHRPVSLS PSVLFGLCNE
301: ALRQDYCADI SVVPTKGLGH GHQFWNSTTC GSDMGNSNSK IDAVSAVIRD DEKSRLGLLH YYGLAGATTT AAAAVAPAPL AADAAAGTAT LLPSSAASDQ
401: LQGLLDAAGL LMGETPPTPT ATVVAVARDA VTCAATATAQ FSVPASMRLD VRLAFGEAAL LARHTGEAVP VDESGVTVEP LQQDTLYYVL MVT
101: TKHKLRAAGQ LQPSGSGRSA LQARACAPAP VTPPRNLQLA AAAPVAPPTS SSSSSSDRSS GSSSSKSVTV TPTTAVALAS PAGAAPAAVF RQQGVMPTTA
201: MDLLTPLPSS SAALAARQLY YQYHSQIMAP AAPPMPDTVI ASPEQFLPQW QQGGQQHYYL PATELGGVLD GHSHHTHEPP AAIHRPVSLS PSVLFGLCNE
301: ALRQDYCADI SVVPTKGLGH GHQFWNSTTC GSDMGNSNSK IDAVSAVIRD DEKSRLGLLH YYGLAGATTT AAAAVAPAPL AADAAAGTAT LLPSSAASDQ
401: LQGLLDAAGL LMGETPPTPT ATVVAVARDA VTCAATATAQ FSVPASMRLD VRLAFGEAAL LARHTGEAVP VDESGVTVEP LQQDTLYYVL MVT
001: MASSNRHWPS MFKSKPHPHQ WQHDINSPLL PSASHRSSPF SSGCEVERSP EPKPRWNPKP EQIRILEAIF NSGMVNPPRE EIRRIRAQLQ EYGQVGDANV
101: FYWFQNRKSR SKHKLRLLHN HSKHSLPQTQ PQPQPQPSAS SSSSSSSSSS KSTKPRKSKN KNNTNLSLGG SQMMGMFPPE PAFLFPVSTV GGFEGITVSS
201: QLGFLSGDMI EQQKPAPTCT GLLLSEIMNG SVSYGTHHQQ HLSEKEVEEM RMKMLQQPQT QICYATTNHQ IASYNNNNNN NNIMLHIPPT TSTATTITTS
301: HSLATVPSTS DQLQVQADAR IRVFINEMEL EVSSGPFNVR DAFGEEVVLI NSAGQPIVTD EYGVALHPLQ HGASYYLI
101: FYWFQNRKSR SKHKLRLLHN HSKHSLPQTQ PQPQPQPSAS SSSSSSSSSS KSTKPRKSKN KNNTNLSLGG SQMMGMFPPE PAFLFPVSTV GGFEGITVSS
201: QLGFLSGDMI EQQKPAPTCT GLLLSEIMNG SVSYGTHHQQ HLSEKEVEEM RMKMLQQPQT QICYATTNHQ IASYNNNNNN NNIMLHIPPT TSTATTITTS
301: HSLATVPSTS DQLQVQADAR IRVFINEMEL EVSSGPFNVR DAFGEEVVLI NSAGQPIVTD EYGVALHPLQ HGASYYLI
Arabidopsis Description
WOX9WOX9A [Source:UniProtKB/TrEMBL;Acc:A0A178VQA8]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.