Factsheet for Zm00001d001948_P001

Subcellular Localization

min:

: max

Winner_takes_all: plastid, nucleus

Predictor Summary:

plastid 2
nucleus 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus, plastid
Any Predictor:	mitochondrion, nucleus, plastid
ChloroP:	plastid
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
OQU82514	Sorghum	nucleus	83.75	81.96
Zm00001d026537_P001	Maize	plastid	75.31	74.15
Os04t0663600-01	Rice	nucleus	48.12	53.29
Zm00001d037309_P001	Maize	nucleus	20.31	51.59
TraesCS2A01G491900.1	Wheat	mitochondrion, plastid	41.88	43.51
Zm00001d010998_P001	Maize	nucleus	17.5	25.45
Zm00001d042821_P001	Maize	nucleus	17.19	24.89
Zm00001d012330_P001	Maize	nucleus	17.19	23.4
Zm00001d035535_P001	Maize	nucleus	18.75	23.26
Zm00001d026453_P001	Maize	plastid	15.94	20.4
Zm00001d052598_P001	Maize	nucleus	16.88	20.38
Zm00001d004889_P001	Maize	nucleus	16.56	20.23
Zm00001d042920_P001	Maize	nucleus	19.69	19.44
Zm00001d012419_P001	Maize	nucleus	17.5	16.33
Zm00001d022524_P001	Maize	nucleus	13.12	16.22
Zm00001d012516_P001	Maize	nucleus	13.12	14.89
Zm00001d047559_P001	Maize	nucleus	13.75	13.97
Zm00001d028986_P001	Maize	nucleus	13.44	13.31
Zm00001d043076_P001	Maize	nucleus	11.25	13.19
Zm00001d024410_P001	Maize	nucleus	11.88	12.93
Zm00001d039017_P001	Maize	nucleus	13.44	8.72

Protein Annotations

Gene3D:1.10.10.60	EntrezGene:100037786	MapMan:15.5.3.6	UniProt:A0A1D6DUR9	GO:GO:0003674	GO:GO:0003676
GO:GO:0003677	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
InterPro:Homeobox-like_sf	InterPro:Homeobox_dom	InterPro:IPR001356	ProteinID:ONM12552.1	PFAM:PF00046	PFscan:PS50071
PANTHER:PTHR24326	PANTHER:PTHR24326:SF123	SMART:SM00389	SUPFAM:SSF46689	UniParc:UPI0002217B76	EnsemblPlantsGene:Zm00001d001948
EnsemblPlants:Zm00001d001948_P001	EnsemblPlants:Zm00001d001948_T001	SEG:seg	:	:	:

Description

Homeobox-transcription factor 67WUS1 protein

Coordinates

chr2:+:3416796..3418004

Molecular Weight (calculated)

33089.8 Da

IEP (calculated)

8.113

GRAVY (calculated)

-0.307

Length

320 amino acids

Sequence
(BLAST)

001: MAANVGAGRS AGGGGAGTGT GTAAGSGGVS TAVCRPSGSR WTPTPEQIRI LKELYYGCGI RSPNSEQIQR ITAMLRQHGK IEGKNVFYWF QNHKARERQK
101: RRLTNLDVNV PVAADDSAHR LGVLSLSPSS GCSGAAPPSP TLGFYAGGNG SAVMLDTSSD WGSAAAMATE ACFMQDYMGV MGGASPWACS SSSSEDPMAA
201: LALAPKVTRA PETLPLFPTG GGGDDRQPPR PRQSVPAGEA IRGGSSSSSY LPFWGAAPTP TGSATSVAIQ QQHQLMQMQE QYSFYSNAQL LPGTGSQDAA
301: ATSLELSLSS WCSPYPAGTM

Best Arabidopsis Sequence Match ( AT2G17950.1 )
(BLAST)

001: MEPPQHQHHH HQADQESGNN NNNKSGSGGY TCRQTSTRWT PTTEQIKILK ELYYNNAIRS PTADQIQKIT ARLRQFGKIE GKNVFYWFQN HKARERQKKR
101: FNGTNMTTPS SSPNSVMMAA NDHYHPLLHH HHGVPMQRPA NSVNVKLNQD HHLYHHNKPY PSFNNGNLNH ASSGTECGVV NASNGYMSSH VYGSMEQDCS
201: MNYNNVGGGW ANMDHHYSSA PYNFFDRAKP LFGLEGHQEE EECGGDAYLE HRRTLPLFPM HGEDHINGGS GAIWKYGQSE VRPCASLELR LN

Arabidopsis Description

WUSProtein WUSCHEL [Source:UniProtKB/Swiss-Prot;Acc:Q9SB92]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.