Factsheet for Zm00001d026453_P001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 4
mitochondrion 1
nucleus 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	mitochondrion, nucleus, plastid
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	nucleus
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
OQU82449	Sorghum	plastid	87.2	88.98
Os04t0649400-01	Rice	plastid	62.8	66.53
TraesCS2B01G542600.1	Wheat	plastid	61.6	64.98
TraesCS2A01G514000.1	Wheat	plastid	60.8	64.96
TraesCS2D01G515600.1	Wheat	plastid	60.8	64.14
GSMUA_Achr8P15620_001	Banana	nucleus, plastid	41.6	44.44
Zm00001d037309_P001	Maize	nucleus	13.6	26.98
Zm00001d010998_P001	Maize	nucleus	21.2	24.09
Zm00001d012330_P001	Maize	nucleus	20.4	21.7
Zm00001d035535_P001	Maize	nucleus	21.6	20.93
Zm00001d042821_P001	Maize	nucleus	18.4	20.81
Zm00001d004889_P001	Maize	nucleus	19.6	18.7
Zm00001d052598_P001	Maize	nucleus	19.6	18.49
Zm00001d042920_P001	Maize	nucleus	23.2	17.9
Zm00001d026537_P001	Maize	plastid	21.2	16.31
Zm00001d001948_P001	Maize	nucleus, plastid	20.4	15.94
Zm00001d012419_P001	Maize	nucleus	21.2	15.45
Zm00001d022524_P001	Maize	nucleus	14.0	13.51
Zm00001d043076_P001	Maize	nucleus	13.6	12.45
Zm00001d012516_P001	Maize	nucleus	13.6	12.06
Zm00001d028986_P001	Maize	nucleus	14.4	11.15
Zm00001d047559_P001	Maize	nucleus	14.0	11.11
Zm00001d024410_P001	Maize	nucleus	10.8	9.18
Zm00001d039017_P001	Maize	nucleus	14.0	7.1

Protein Annotations

Gene3D:1.10.10.60	EntrezGene:103642126	MapMan:15.5.3.6	ProteinID:AQK46669.1	UniProt:B6TH10	EMBL:BT085195
EMBL:EU964275	GO:GO:0000003	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0005488
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0007154	GO:GO:0007165
GO:GO:0007275	GO:GO:0008150	GO:GO:0009790	GO:GO:0009791	GO:GO:0009987	GO:GO:0010067
GO:GO:0010087	GO:GO:0051301	InterPro:Homeobox-like_sf	InterPro:Homeobox_dom	InterPro:IPR001356	PFAM:PF00046
PFscan:PS50071	PANTHER:PTHR24326	PANTHER:PTHR24326:SF263	SMART:SM00389	SUPFAM:SSF46689	UniParc:UPI00005B0A42
EnsemblPlantsGene:Zm00001d026453	EnsemblPlants:Zm00001d026453_P001	EnsemblPlants:Zm00001d026453_T001	SEG:seg	:	:

Description

wuschel-related homeobox4WUSCHEL-related homeobox 4

Coordinates

chr10:-:146111095..146112832

Molecular Weight (calculated)

27721.8 Da

IEP (calculated)

8.608

GRAVY (calculated)

-0.582

Length

250 amino acids

Sequence
(BLAST)

001: MRLHHFHVAY LDKAAGSPPP SSSPPSISPA SHSHSSSSAA TIVPLALQQY CLRPLAPKIS FPEARKMVVL PEFARVRNAS SRLLNCTVQV PPTTTTVGGT
101: TRWNPSPDQI RVLEMLYRGG MRTPNSFQIE QITEELGKYG RIEGKNVFYW FQNHKARERQ KQKRAALLTL STTTTASTLL PPAAETKEGV ETKKEEACED
201: ASSRKRRCRA WEDVVVHGGG DDAGTEVADD YYTDDDVTLE LFPLRPDQGK

Best Arabidopsis Sequence Match ( AT1G46480.1 )
(BLAST)

001: MKVHEFSNGF SSSWDQHDST SSLSLSCKRL RPLAPKLSGS PPSPPSSSSG VTSATFDLKN FIRPDQTGPT KFEHKRDPPH QLETHPGGTR WNPTQEQIGI
101: LEMLYKGGMR TPNAQQIEHI TLQLGKYGKI EGKNVFYWFQ NHKARERQKQ KRNNLISLSC QSSFTTTGVF NPSVTMKTRT SSSLDIMREP MVEKEELVEE
201: NEYKRTCRSW GFENLEIENR RNKNSSTMAT TFNKIIDNVT LELFPLHPEG R

Arabidopsis Description

WOX4WUSCHEL-related homeobox 4 [Source:UniProtKB/Swiss-Prot;Acc:Q6X7J9]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.