Factsheet for Zm00001d012419_P001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os01t0840300-00	Rice	cytosol, mitochondrion, nucleus	14.87	78.46
Zm00001d042920_P001	Maize	nucleus	59.48	62.96
HORVU5Hr1G022120.1	Barley	nucleus	38.78	48.19
TraesCS5A01G085000.1	Wheat	nucleus	42.86	46.23
TraesCS5D01G097400.1	Wheat	nucleus	43.15	45.96
TraesCS5B01G091000.1	Wheat	nucleus	41.98	44.86
HORVU3Hr1G086450.1	Barley	nucleus, plastid	29.45	36.86
TraesCS3D01G352600.1	Wheat	nucleus	30.32	36.49
TraesCS3B01G391100.1	Wheat	nucleus	31.78	36.45
TraesCS3D01G352500.1	Wheat	nucleus	31.49	36.24
TraesCS3A01G358100.1	Wheat	nucleus	31.49	35.88
TraesCS3A01G358200.1	Wheat	nucleus	29.15	34.72
TraesCS3B01G391200.1	Wheat	nucleus	28.57	33.79
TraesCS3D01G352700.1	Wheat	nucleus	28.57	33.68
TraesCS3A01G358400.1	Wheat	nucleus	27.99	33.1
HORVU3Hr1G086430.1	Barley	nucleus	27.11	32.86
Zm00001d010998_P001	Maize	nucleus	19.53	30.45
Zm00001d037309_P001	Maize	nucleus	10.2	27.78
Zm00001d035535_P001	Maize	nucleus	20.41	27.13
Zm00001d004889_P001	Maize	nucleus	17.78	23.28
Zm00001d042821_P001	Maize	nucleus	14.87	23.08
Zm00001d012330_P001	Maize	nucleus	14.87	21.7
Zm00001d052598_P001	Maize	nucleus	16.62	21.51
Zm00001d026453_P001	Maize	plastid	15.45	21.2
Zm00001d026537_P001	Maize	plastid	16.91	17.85
Zm00001d001948_P001	Maize	nucleus, plastid	16.33	17.5
Zm00001d022524_P001	Maize	nucleus	10.79	14.29
Zm00001d012516_P001	Maize	nucleus	10.5	12.77
Zm00001d043076_P001	Maize	nucleus	9.91	12.45
Zm00001d028986_P001	Maize	nucleus	11.66	12.38
Zm00001d024410_P001	Maize	nucleus	9.91	11.56
Zm00001d047559_P001	Maize	nucleus	10.2	11.11
Zm00001d039017_P001	Maize	nucleus	11.08	7.71

Protein Annotations

Gene3D:1.10.10.60	MapMan:15.5.3.6	UniProt:A0A1D6G8N0	ProteinID:AQK99504.1	GO:GO:0003674	GO:GO:0003676
GO:GO:0003677	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
InterPro:Homeobox-like_sf	InterPro:Homeobox_dom	InterPro:IPR001356	PFAM:PF00046	PFscan:PS50071	PANTHER:PTHR24326
PANTHER:PTHR24326:SF203	SMART:SM00389	SUPFAM:SSF46689	UniParc:UPI0004DEAF28	EnsemblPlantsGene:Zm00001d012419	EnsemblPlants:Zm00001d012419_P001
EnsemblPlants:Zm00001d012419_T001	SEG:seg	:	:	:	:

Description

WUSCHEL-related homeobox 2bWUSCHEL-related homeobox 2

Coordinates

chr8:+:174174647..174177720

Molecular Weight (calculated)

37013.4 Da

IEP (calculated)

9.147

GRAVY (calculated)

-0.601

Length

343 amino acids

Sequence
(BLAST)

001: MDMEIPQQQA AHGQDESGPA APPLSPASAA AAARWNPTKE QVAVLEGLYE HGLRSPSAEQ IQQIADRLRE HGHGHGAIEG KSVFYWFQNH RARLRQQRQK
101: QESFAYFTRL LRRPPPLPVL SMPPAPPYRH GRVPSPATIT MPAPPPPTPA ACYNSGGSRA VMYMNPFYMT VPQLPPANAA AYYYPQQQQQ QQVTVMYQQY
201: PRMEVGQDKT TTPPAATFQQ AAAAPRGAAS TTPPQVLHSP SPPAINNGAR GPADQRVGRP SRDRDLETLQ LFPLQPTFAQ LRRDKGNAAA GSSASSLTST
301: AVAASASVVS EDAENLESAE SNGGEAPALP FYDFFGLQSA AGR

Best Arabidopsis Sequence Match ( AT5G59340.1 )
(BLAST)

001: MENEVNAGTA SSSRWNPTKD QITLLENLYK EGIRTPSADQ IQQITGRLRA YGHIEGKNVF YWFQNHKARQ RQKQKQERMA YFNRLLHKTS RFFYPPPCSN
101: VGCVSPYYLQ QASDHHMNQH GSVYTNDLLH RNNVMIPSGG YEKRTVTQHQ KQLSDIRTTA ATRMPISPSS LRFDRFALRD NCYAGEDINV NSSGRKTLPL
201: FPLQPLNASN ADGMGSSSFA LGSDSPVDCS SDGAGREQPF IDFFSGGSTS TRFDSNGNGL

Arabidopsis Description

WOX2WUSCHEL-related homeobox 2 [Source:UniProtKB/Swiss-Prot;Acc:Q6X7K1]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.