Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KXG24798 | Sorghum | nucleus | 76.19 | 81.16 |
| TraesCS3A01G073500.1 | Wheat | nucleus | 58.16 | 65.77 |
| HORVU3Hr1G013290.3 | Barley | nucleus | 57.48 | 64.75 |
| TraesCS3B01G087800.1 | Wheat | nucleus | 57.48 | 64.75 |
| TraesCS3D01G073300.1 | Wheat | nucleus | 57.48 | 64.75 |
| HORVU3Hr1G013330.1 | Barley | nucleus | 41.5 | 62.89 |
| Os08t0242400-01 | Rice | nucleus | 57.48 | 59.51 |
| Zm00001d022524_P001 | Maize | nucleus | 43.54 | 49.42 |
| GSMUA_Achr10P... | Banana | nucleus | 39.12 | 47.13 |
| VIT_08s0056g01200.t01 | Wine grape | nucleus | 36.05 | 44.92 |
| GSMUA_Achr10P... | Banana | nucleus | 38.44 | 42.48 |
| PGSC0003DMT400069529 | Potato | nucleus | 34.69 | 41.63 |
| Zm00001d028986_P001 | Maize | nucleus | 43.54 | 39.63 |
| Bra036446.1-P | Field mustard | nucleus | 35.71 | 39.62 |
| KRG94925 | Soybean | nucleus | 37.41 | 39.29 |
| Zm00001d047559_P001 | Maize | nucleus | 41.84 | 39.05 |
| Solyc06g072890.1.1 | Tomato | nucleus | 34.69 | 38.64 |
| KRH64971 | Soybean | nucleus | 38.1 | 37.97 |
| CDY21173 | Canola | nucleus | 37.07 | 37.72 |
| CDY29949 | Canola | nucleus | 37.07 | 37.72 |
| AT5G17810.2 | Thale cress | nucleus | 34.35 | 37.69 |
| CDY38461 | Canola | nucleus | 35.03 | 37.59 |
| Bra002108.1-P | Field mustard | nucleus | 34.01 | 36.63 |
| GSMUA_Achr5P27730_001 | Banana | nucleus | 38.78 | 36.54 |
| Bra023638.1-P | Field mustard | nucleus | 34.01 | 36.36 |
| GSMUA_Achr6P15910_001 | Banana | nucleus | 39.12 | 36.28 |
| CDY16883 | Canola | nucleus | 33.67 | 35.87 |
| CDY02686 | Canola | nucleus | 34.01 | 35.34 |
| CDY66087 | Canola | nucleus | 33.33 | 35.0 |
| AT3G03660.3 | Thale cress | nucleus, plastid | 36.39 | 32.82 |
| Bra031980.1-P | Field mustard | nucleus | 35.37 | 32.3 |
| CDY51756 | Canola | plastid | 35.37 | 31.9 |
| GSMUA_Achr9P05010_001 | Banana | nucleus, plastid | 38.78 | 31.41 |
| CDY72488 | Canola | nucleus, plastid | 26.19 | 31.17 |
| CDY50656 | Canola | nucleus | 35.03 | 30.38 |
| GSMUA_Achr8P01590_001 | Banana | nucleus | 38.78 | 27.14 |
| Zm00001d037309_P001 | Maize | nucleus | 7.48 | 17.46 |
| Zm00001d039017_P001 | Maize | nucleus | 25.85 | 15.42 |
| Zm00001d042821_P001 | Maize | nucleus | 10.88 | 14.48 |
| Zm00001d012330_P001 | Maize | nucleus | 11.56 | 14.47 |
| Zm00001d043076_P001 | Maize | nucleus | 13.27 | 14.29 |
| Zm00001d004889_P001 | Maize | nucleus | 12.59 | 14.12 |
| Zm00001d010998_P001 | Maize | nucleus | 10.54 | 14.09 |
| Zm00001d052598_P001 | Maize | nucleus | 12.59 | 13.96 |
| Zm00001d012516_P001 | Maize | nucleus | 12.93 | 13.48 |
| Zm00001d035535_P001 | Maize | nucleus | 11.22 | 12.79 |
| Zm00001d026537_P001 | Maize | plastid | 13.61 | 12.31 |
| Zm00001d001948_P001 | Maize | nucleus, plastid | 12.93 | 11.88 |
| Zm00001d026453_P001 | Maize | plastid | 9.18 | 10.8 |
| Zm00001d012419_P001 | Maize | nucleus | 11.56 | 9.91 |
| Zm00001d042920_P001 | Maize | nucleus | 10.88 | 9.88 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.3.6 | UniProt:A0A1D6IZ36 | ProteinID:AQK41133.1 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| InterPro:Homeobox-like_sf | InterPro:Homeobox_dom | InterPro:IPR001356 | PFAM:PF00046 | PFscan:PS50071 | PANTHER:PTHR24326 |
| PANTHER:PTHR24326:SF202 | SMART:SM00389 | SUPFAM:SSF46689 | UniParc:UPI000844BB50 | EnsemblPlantsGene:Zm00001d024410 | EnsemblPlants:Zm00001d024410_P001 |
| EnsemblPlants:Zm00001d024410_T001 | SEG:seg | : | : | : | : |
Description
Homeobox-transcription factor 73Putative homeobox DNA-binding domain superfamily protein
Coordinates
chr10:+:69483649..69484945
Molecular Weight (calculated)
31408.0 Da
IEP (calculated)
7.871
GRAVY (calculated)
-0.336
Length
294 amino acids
Sequence
(BLAST)
(BLAST)
001: MGSHSHLGQA LQAHHHHHHH HRGGECEPAT AAAARSRWAP KPEQILILES IFNSGMVNPA KDETARIRRL LERFGAVRDA NVFYWFQNRR SRSRRRARQL
101: QQQQAGSGPQ HPTAAAAAGH VHGANANDGV SLYAMHGHAG QQQQARAAGL PAVAPVVLPP AAVASSPRFF GDEIDTDGGD DLFAISRQMG LMSRGGEQHG
201: CGYVANNDAS QSHLLSYQPT GTATTAAAAY IQVSINGVVY EVPGAGALLD LAGTFGRDAM LVHSSGEILP VNENGVLMKS LQMGECYYLV GHQL
101: QQQQAGSGPQ HPTAAAAAGH VHGANANDGV SLYAMHGHAG QQQQARAAGL PAVAPVVLPP AAVASSPRFF GDEIDTDGGD DLFAISRQMG LMSRGGEQHG
201: CGYVANNDAS QSHLLSYQPT GTATTAAAAY IQVSINGVVY EVPGAGALLD LAGTFGRDAM LVHSSGEILP VNENGVLMKS LQMGECYYLV GHQL
001: MNQEGASHSP SSTSTEPVRA RWSPKPEQIL ILESIFNSGT VNPPKDETVR IRKMLEKFGA VGDANVFYWF QNRRSRSRRR HRQLLAATTA AATSIGAEDH
101: QHMTAMSMHQ YPCSNNEIDL GFGSCSNLSA NYFLNGSSSS QIPSFFLGLS SSSGGCENNN GMENLFKMYG HESDHNHQQQ HHSSNAASVL NPSDQNSNSQ
201: YEQGFMTVFI NGVPMEVTKG AIDMKTMFGD DSVLLHSSGL PLPTDEFGFL MHSLQHGQTY FLVPRQT
101: QHMTAMSMHQ YPCSNNEIDL GFGSCSNLSA NYFLNGSSSS QIPSFFLGLS SSSGGCENNN GMENLFKMYG HESDHNHQQQ HHSSNAASVL NPSDQNSNSQ
201: YEQGFMTVFI NGVPMEVTKG AIDMKTMFGD DSVLLHSSGL PLPTDEFGFL MHSLQHGQTY FLVPRQT
Arabidopsis Description
WOX12WUSCHEL-related homeobox 12 [Source:UniProtKB/Swiss-Prot;Acc:Q8GY25]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.