Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra002108.1-P | Field mustard | nucleus | 97.08 | 97.44 |
| CDY16883 | Canola | nucleus | 94.89 | 94.2 |
| CDY66087 | Canola | nucleus | 83.58 | 81.79 |
| CDY02686 | Canola | nucleus | 82.48 | 79.86 |
| AT5G17810.2 | Thale cress | nucleus | 75.55 | 77.24 |
| CDY21173 | Canola | nucleus | 64.23 | 60.9 |
| CDY29949 | Canola | nucleus | 64.23 | 60.9 |
| VIT_08s0056g01200.t01 | Wine grape | nucleus | 47.81 | 55.51 |
| CDY51756 | Canola | plastid | 62.77 | 52.76 |
| CDY72488 | Canola | nucleus, plastid | 47.45 | 52.63 |
| PGSC0003DMT400069529 | Potato | nucleus | 46.72 | 52.24 |
| CDY50656 | Canola | nucleus | 64.23 | 51.92 |
| Solyc06g072890.1.1 | Tomato | nucleus | 47.08 | 48.86 |
| Os07t0684900-01 | Rice | nucleus | 45.62 | 47.71 |
| TraesCS2B01G117900.1 | Wheat | nucleus | 45.26 | 47.51 |
| TraesCS2A01G100700.1 | Wheat | nucleus | 45.26 | 46.79 |
| KRG94925 | Soybean | nucleus | 47.81 | 46.79 |
| GSMUA_Achr10P... | Banana | nucleus | 41.61 | 46.72 |
| Zm00001d022524_P001 | Maize | nucleus | 44.16 | 46.72 |
| TraesCS2D01G100200.1 | Wheat | nucleus | 44.89 | 46.59 |
| KRH64971 | Soybean | nucleus | 48.18 | 44.75 |
| TraesCS4B01G174400.1 | Wheat | nucleus | 47.45 | 42.07 |
| TraesCS4D01G176400.1 | Wheat | nucleus | 46.72 | 41.83 |
| TraesCS4A01G130200.1 | Wheat | nucleus | 46.72 | 41.69 |
| KXG39473 | Sorghum | nucleus | 46.72 | 40.76 |
| Zm00001d047559_P001 | Maize | nucleus | 46.72 | 40.63 |
| TraesCS3D01G073300.1 | Wheat | nucleus | 38.69 | 40.61 |
| TraesCS3A01G073500.1 | Wheat | nucleus | 38.32 | 40.38 |
| Os08t0242400-01 | Rice | nucleus | 41.61 | 40.14 |
| HORVU3Hr1G013290.3 | Barley | nucleus | 37.59 | 39.46 |
| KXG24798 | Sorghum | nucleus | 39.42 | 39.13 |
| TraesCS3B01G087800.1 | Wheat | nucleus | 37.23 | 39.08 |
| Zm00001d028986_P001 | Maize | nucleus | 45.62 | 38.7 |
| OQU90491 | Sorghum | nucleus | 36.5 | 38.46 |
| GSMUA_Achr10P... | Banana | nucleus | 37.23 | 38.35 |
| GSMUA_Achr6P15910_001 | Banana | nucleus | 43.8 | 37.85 |
| GSMUA_Achr3P09460_001 | Banana | nucleus | 44.16 | 37.81 |
| HORVU3Hr1G013330.1 | Barley | nucleus | 26.28 | 37.11 |
| GSMUA_Achr5P27730_001 | Banana | nucleus | 40.15 | 35.26 |
| Zm00001d024410_P001 | Maize | nucleus | 37.59 | 35.03 |
| Os03t0325600-01 | Rice | nucleus | 44.89 | 34.55 |
| GSMUA_Achr9P05010_001 | Banana | nucleus, plastid | 43.8 | 33.06 |
| HORVU4Hr1G051530.5 | Barley | nucleus | 35.77 | 28.41 |
| GSMUA_Achr8P01590_001 | Banana | nucleus | 43.07 | 28.1 |
| CDX87744 | Canola | nucleus | 31.02 | 26.56 |
| CDY48780 | Canola | nucleus | 31.02 | 26.56 |
| CDY17211 | Canola | nucleus | 33.21 | 23.33 |
| CDY69228 | Canola | nucleus | 33.21 | 23.33 |
| CDX79549 | Canola | nucleus | 30.66 | 21.16 |
| CDY01358 | Canola | nucleus | 10.22 | 21.05 |
| CDY31870 | Canola | nucleus | 13.87 | 19.49 |
| CDX93197 | Canola | nucleus | 13.87 | 19.49 |
| CDY70975 | Canola | nucleus | 11.68 | 19.28 |
| CDY71075 | Canola | nucleus | 7.66 | 17.36 |
| CDY29511 | Canola | nucleus | 12.77 | 17.24 |
| CDY65899 | Canola | nucleus | 12.77 | 16.75 |
| CDY41648 | Canola | nucleus | 10.22 | 16.37 |
| CDY01007 | Canola | nucleus | 11.31 | 16.23 |
| CDX69148 | Canola | nucleus | 14.96 | 15.47 |
| CDY08539 | Canola | nucleus | 10.58 | 15.18 |
| CDY24814 | Canola | nucleus | 13.14 | 15.06 |
| CDY31716 | Canola | nucleus | 12.77 | 14.96 |
| CDX72546 | Canola | nucleus | 14.23 | 14.94 |
| CDX75511 | Canola | nucleus | 13.87 | 14.84 |
| CDY40623 | Canola | nucleus | 14.23 | 14.83 |
| CDY04966 | Canola | nucleus | 9.85 | 14.14 |
| CDY14103 | Canola | nucleus | 9.85 | 14.14 |
| CDX70130 | Canola | nucleus | 9.85 | 14.06 |
| CDX98862 | Canola | nucleus | 9.85 | 14.06 |
| CDX77191 | Canola | nucleus | 12.04 | 13.98 |
| CDX95764 | Canola | nucleus | 10.95 | 13.51 |
| CDY40847 | Canola | nucleus | 12.41 | 13.33 |
| CDY17046 | Canola | nucleus | 12.41 | 13.28 |
| CDX83299 | Canola | nucleus | 10.95 | 13.27 |
| CDY47803 | Canola | nucleus | 14.6 | 13.24 |
| CDY02582 | Canola | nucleus | 5.84 | 13.22 |
| CDY38144 | Canola | nucleus | 14.23 | 12.91 |
| CDY55370 | Canola | nucleus | 14.23 | 12.91 |
| CDY43848 | Canola | nucleus | 11.68 | 12.75 |
| CDY41086 | Canola | nucleus | 12.41 | 12.73 |
| CDY30337 | Canola | nucleus | 14.6 | 12.66 |
| CDY29212 | Canola | nucleus | 13.5 | 12.59 |
| CDY25659 | Canola | nucleus | 11.31 | 12.35 |
| CDY33728 | Canola | nucleus | 12.04 | 12.0 |
| CDX81686 | Canola | nucleus | 12.41 | 11.72 |
| CDY02885 | Canola | nucleus | 8.39 | 11.56 |
| CDX80277 | Canola | nucleus | 8.76 | 11.43 |
| CDY33030 | Canola | nucleus | 8.76 | 11.43 |
| CDY32648 | Canola | nucleus | 6.93 | 10.86 |
| CDY51928 | Canola | nucleus | 13.5 | 10.48 |
| CDY66658 | Canola | nucleus | 13.14 | 10.26 |
| CDX92182 | Canola | nucleus | 13.14 | 10.26 |
| CDX75955 | Canola | nucleus | 12.77 | 10.0 |
| CDY29211 | Canola | mitochondrion | 4.38 | 8.05 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.3.6 | GO:A0A078HLD3 | UniProt:A0A078HLD3 | EnsemblPlants:CDY38461 | ProteinID:CDY38461 |
| ProteinID:CDY38461.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | EnsemblPlantsGene:GSBRNA2T00065904001 | InterPro:Homeobox-like_sf | InterPro:Homeobox_dom |
| InterPro:IPR001356 | PFAM:PF00046 | PFscan:PS50071 | PANTHER:PTHR24326 | PANTHER:PTHR24326:SF185 | SMART:SM00389 |
| SUPFAM:SSF46689 | UniParc:UPI0004EEB389 | SEG:seg | : | : | : |
Description
BnaA10g16970DBnaA10g16970D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HLD3]
Coordinates
chrLK032424:-:143600..145731
Molecular Weight (calculated)
30344.2 Da
IEP (calculated)
6.848
GRAVY (calculated)
-0.610
Length
274 amino acids
Sequence
(BLAST)
(BLAST)
001: MDQEGAPQSR QGRSPSATTN STEPVRTRWS PKPEQILILE SIFNSGIVNP PKDETVRIRK KLEKFGAVGD ANVFYWFQNR RSRSRRRQRQ LQAANAAAIA
101: TRGVEDPQHM TTVSMHHPYR NNEIDLGFGS CSNSSANYLF NESSSQVSSF LLGLSSSSTN GGCESNNGMG DLFTMYGHES DHHHFHHPQH SSNDASISSP
201: SDQNSSIHYQ QGLMTVFING VPTEVTNGAI DMKAMFGEDL VLLHSSGLPL PTDEFGFLIS LQHGQSYFLV PRQT
101: TRGVEDPQHM TTVSMHHPYR NNEIDLGFGS CSNSSANYLF NESSSQVSSF LLGLSSSSTN GGCESNNGMG DLFTMYGHES DHHHFHHPQH SSNDASISSP
201: SDQNSSIHYQ QGLMTVFING VPTEVTNGAI DMKAMFGEDL VLLHSSGLPL PTDEFGFLIS LQHGQSYFLV PRQT
001: MNQEGASHSP SSTSTEPVRA RWSPKPEQIL ILESIFNSGT VNPPKDETVR IRKMLEKFGA VGDANVFYWF QNRRSRSRRR HRQLLAATTA AATSIGAEDH
101: QHMTAMSMHQ YPCSNNEIDL GFGSCSNLSA NYFLNGSSSS QIPSFFLGLS SSSGGCENNN GMENLFKMYG HESDHNHQQQ HHSSNAASVL NPSDQNSNSQ
201: YEQGFMTVFI NGVPMEVTKG AIDMKTMFGD DSVLLHSSGL PLPTDEFGFL MHSLQHGQTY FLVPRQT
101: QHMTAMSMHQ YPCSNNEIDL GFGSCSNLSA NYFLNGSSSS QIPSFFLGLS SSSGGCENNN GMENLFKMYG HESDHNHQQQ HHSSNAASVL NPSDQNSNSQ
201: YEQGFMTVFI NGVPMEVTKG AIDMKTMFGD DSVLLHSSGL PLPTDEFGFL MHSLQHGQTY FLVPRQT
Arabidopsis Description
WOX12WUSCHEL-related homeobox 12 [Source:UniProtKB/Swiss-Prot;Acc:Q8GY25]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.