Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
| Predictors | GFP | MS/MS | Papers | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4A01G130200.1 | Wheat | nucleus | 66.09 | 74.27 |
| TraesCS4D01G176400.1 | Wheat | nucleus | 65.8 | 74.18 |
| TraesCS4B01G174400.1 | Wheat | nucleus | 65.51 | 73.14 |
| KXG39473 | Sorghum | nucleus | 59.71 | 65.61 |
| Zm00001d047559_P001 | Maize | nucleus | 58.26 | 63.81 |
| Zm00001d028986_P001 | Maize | nucleus | 59.42 | 63.47 |
| Os03t0325600-01 | Rice | nucleus | 60.0 | 58.15 |
| GSMUA_Achr10P... | Banana | nucleus | 35.07 | 49.59 |
| HORVU3Hr1G013330.1 | Barley | nucleus | 25.22 | 44.85 |
| VIT_08s0056g01200.t01 | Wine grape | nucleus | 28.12 | 41.1 |
| Bra036446.1-P | Field mustard | nucleus | 31.3 | 40.75 |
| KRG94925 | Soybean | nucleus | 33.04 | 40.71 |
| CDY72488 | Canola | nucleus, plastid | 28.12 | 39.27 |
| CDY21173 | Canola | nucleus | 32.17 | 38.41 |
| CDY29949 | Canola | nucleus | 32.17 | 38.41 |
| PGSC0003DMT400069529 | Potato | nucleus | 27.25 | 38.37 |
| KRH64971 | Soybean | nucleus | 32.75 | 38.31 |
| HORVU3Hr1G013290.3 | Barley | nucleus | 28.7 | 37.93 |
| GSMUA_Achr6P15910_001 | Banana | nucleus | 33.91 | 36.91 |
| GSMUA_Achr10P... | Banana | nucleus | 28.41 | 36.84 |
| Solyc06g072890.1.1 | Tomato | nucleus | 28.12 | 36.74 |
| Bra002108.1-P | Field mustard | nucleus | 28.7 | 36.26 |
| GSMUA_Achr5P27730_001 | Banana | nucleus | 32.46 | 35.9 |
| CDY16883 | Canola | nucleus | 28.7 | 35.87 |
| AT5G17810.2 | Thale cress | nucleus | 27.83 | 35.82 |
| CDY38461 | Canola | nucleus | 28.41 | 35.77 |
| CDY02686 | Canola | nucleus | 28.99 | 35.34 |
| Bra023638.1-P | Field mustard | nucleus | 27.83 | 34.91 |
| HORVU1Hr1G087950.1 | Barley | nucleus | 12.75 | 34.11 |
| AT3G03660.3 | Thale cress | nucleus, plastid | 32.17 | 34.05 |
| CDY66087 | Canola | nucleus | 27.25 | 33.57 |
| Bra031980.1-P | Field mustard | nucleus | 31.01 | 33.23 |
| CDY51756 | Canola | plastid | 31.3 | 33.13 |
| GSMUA_Achr9P05010_001 | Banana | nucleus, plastid | 32.75 | 31.13 |
| CDY50656 | Canola | nucleus | 30.43 | 30.97 |
| GSMUA_Achr8P01590_001 | Banana | nucleus | 32.17 | 26.43 |
| HORVU3Hr1G080690.1 | Barley | nucleus | 8.99 | 23.85 |
| HORVU5Hr1G049190.2 | Barley | nucleus | 8.7 | 16.13 |
| HORVU3Hr1G085050.3 | Barley | nucleus | 8.99 | 14.76 |
| HORVU3Hr1G080660.5 | Barley | nucleus | 11.3 | 14.55 |
| HORVU5Hr1G022120.1 | Barley | nucleus | 11.01 | 13.77 |
| HORVU3Hr1G086450.1 | Barley | nucleus, plastid | 10.14 | 12.77 |
| HORVU1Hr1G010580.2 | Barley | nucleus, plastid | 9.57 | 11.74 |
| HORVU3Hr1G060950.1 | Barley | nucleus, plastid | 17.39 | 11.63 |
| HORVU3Hr1G086430.1 | Barley | nucleus | 8.7 | 10.6 |
| HORVU1Hr1G087940.1 | Barley | cytosol, plasma membrane, plastid | 7.25 | 10.04 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.3.6 | UniProt:A0A287P0Y7 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | EnsemblPlantsGene:HORVU4Hr1G051530 |
| EnsemblPlants:HORVU4Hr1G051530.5 | InterPro:Homeobox-like_sf | InterPro:Homeobox_dom | InterPro:IPR001356 | PFAM:PF00046 | PFscan:PS50071 |
| PANTHER:PTHR24326 | PANTHER:PTHR24326:SF280 | SMART:SM00389 | SUPFAM:SSF46689 | UniParc:UPI000B47D88C | SEG:seg |
Description
No Description!
Coordinates
chrchr4H:-:423508679..423511206
Molecular Weight (calculated)
36277.1 Da
IEP (calculated)
9.180
GRAVY (calculated)
-0.492
Length
345 amino acids
Sequence
(BLAST)
(BLAST)
001: MEGSSNSPDG QSSGGSPEER RSSGGRGPGE PVRSRWTPKP EQILILESIF NSGMVNPPKD ETVRIRKLLE RFGAVGDANV FYWFQNRRSR SRRRQRQMQA
101: AAAAAAAAAS ASSVAASSMP AATSTTIGLP SGTGSVHPMA IGGAASQYEQ RATSSSSSGS TGGSSLGLLA HGAGVSGAGV GYLQASCETS SPLASGLMGD
201: VDSSGGGDDL FAISRQMGFA GPSSTAPSTA VQQQYYPCQL PAEICYSVDR YHRNDDHGVH QRSSNGGPEG SNRLASHVWP GRGASPLDRG PPPSQRLWHS
301: NSEPANGRKL FSGNHPYHLS RAFFFMKLAC QHHICLETNL IVPYI
101: AAAAAAAAAS ASSVAASSMP AATSTTIGLP SGTGSVHPMA IGGAASQYEQ RATSSSSSGS TGGSSLGLLA HGAGVSGAGV GYLQASCETS SPLASGLMGD
201: VDSSGGGDDL FAISRQMGFA GPSSTAPSTA VQQQYYPCQL PAEICYSVDR YHRNDDHGVH QRSSNGGPEG SNRLASHVWP GRGASPLDRG PPPSQRLWHS
301: NSEPANGRKL FSGNHPYHLS RAFFFMKLAC QHHICLETNL IVPYI
001: MDQEQTPHSP TRHSRSPPSS ASGSTSAEPV RSRWSPKPEQ ILILESIFHS GMVNPPKEET VRIRKMLEKF GAVGDANVFY WFQNRRSRSR RRQRQLQAAA
101: AAADATTNTC DQTMMVSNSL PHHSGSDLGF GGCSTSSNYL FASSSSSYGG GCDNQSNSGM ENLLTMSGQM SYHEATHHHY QNHSSNVTSI LCPSDQNSNF
201: QYQQGAITVF INGVPTEVTR GGIDMKATFG EDLVLVHSSG VPLPTDEFGF LMHSLQHGEA YFLVPRQT
101: AAADATTNTC DQTMMVSNSL PHHSGSDLGF GGCSTSSNYL FASSSSSYGG GCDNQSNSGM ENLLTMSGQM SYHEATHHHY QNHSSNVTSI LCPSDQNSNF
201: QYQQGAITVF INGVPTEVTR GGIDMKATFG EDLVLVHSSG VPLPTDEFGF LMHSLQHGEA YFLVPRQT
Arabidopsis Description
WOX11WUSCHEL related homeobox 11 [Source:UniProtKB/TrEMBL;Acc:A0A1I9LND8]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.