Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4A01G130200.1 | Wheat | nucleus | 96.73 | 96.42 |
| TraesCS4B01G174400.1 | Wheat | nucleus | 94.77 | 93.85 |
| KXG39473 | Sorghum | nucleus | 82.68 | 80.57 |
| Zm00001d047559_P001 | Maize | nucleus | 79.08 | 76.83 |
| Zm00001d028986_P001 | Maize | nucleus | 81.05 | 76.78 |
| Os03t0325600-01 | Rice | nucleus | 82.03 | 70.51 |
| HORVU4Hr1G051530.5 | Barley | nucleus | 74.18 | 65.8 |
| TraesCS2D01G100200.1 | Wheat | nucleus | 56.54 | 65.53 |
| GSMUA_Achr10P... | Banana | nucleus | 51.31 | 64.34 |
| VIT_08s0056g01200.t01 | Wine grape | nucleus | 41.83 | 54.24 |
| GSMUA_Achr10P... | Banana | nucleus | 43.79 | 50.38 |
| Bra036446.1-P | Field mustard | nucleus | 43.46 | 50.19 |
| KRG94925 | Soybean | nucleus | 45.42 | 49.64 |
| PGSC0003DMT400069529 | Potato | nucleus | 39.54 | 49.39 |
| Solyc06g072890.1.1 | Tomato | nucleus | 40.85 | 47.35 |
| CDY21173 | Canola | nucleus | 44.44 | 47.06 |
| CDY29949 | Canola | nucleus | 44.44 | 47.06 |
| GSMUA_Achr6P15910_001 | Banana | nucleus | 48.69 | 47.0 |
| CDY38461 | Canola | nucleus | 41.83 | 46.72 |
| Bra002108.1-P | Field mustard | nucleus | 41.5 | 46.52 |
| AT5G17810.2 | Thale cress | nucleus | 40.52 | 46.27 |
| GSMUA_Achr5P27730_001 | Banana | nucleus | 47.06 | 46.15 |
| CDY16883 | Canola | nucleus | 41.5 | 46.01 |
| KRH64971 | Soybean | nucleus | 44.12 | 45.76 |
| TraesCS3D01G073300.1 | Wheat | nucleus | 38.24 | 44.83 |
| Bra023638.1-P | Field mustard | nucleus | 39.87 | 44.36 |
| CDY02686 | Canola | nucleus | 40.85 | 44.17 |
| CDY66087 | Canola | nucleus | 38.89 | 42.5 |
| AT3G03660.3 | Thale cress | nucleus, plastid | 43.79 | 41.1 |
| GSMUA_Achr9P05010_001 | Banana | nucleus, plastid | 48.37 | 40.77 |
| CDY72488 | Canola | nucleus, plastid | 32.68 | 40.49 |
| Bra031980.1-P | Field mustard | nucleus | 42.16 | 40.06 |
| CDY51756 | Canola | plastid | 42.48 | 39.88 |
| CDY50656 | Canola | nucleus | 42.48 | 38.35 |
| GSMUA_Achr8P01590_001 | Banana | nucleus | 46.41 | 33.81 |
| TraesCS3D01G361100.1 | Wheat | nucleus | 11.44 | 16.67 |
| TraesCS5D01G162600.1 | Wheat | nucleus | 12.75 | 16.12 |
| TraesCS1D01G406900.1 | Wheat | nucleus | 25.49 | 16.05 |
| TraesCS2D01G515600.1 | Wheat | plastid | 12.09 | 15.61 |
| TraesCS3D01G335500.1 | Wheat | nucleus | 13.07 | 15.21 |
| TraesCS1D01G054000.1 | Wheat | nucleus | 13.07 | 14.98 |
| TraesCS3D01G244300.1 | Wheat | nucleus, plastid | 22.88 | 13.65 |
| TraesCS3D01G352500.1 | Wheat | nucleus | 12.75 | 13.09 |
| TraesCS5D01G097400.1 | Wheat | nucleus | 12.42 | 11.8 |
| TraesCS3D01G352600.1 | Wheat | nucleus | 10.78 | 11.58 |
| TraesCS3D01G352700.1 | Wheat | nucleus | 9.8 | 10.31 |
Protein Annotations
| EnsemblPlants:TraesCS4D01G176400.1 | EnsemblPlantsGene:TraesCS4D01G176400 | Gene3D:1.10.10.60 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0005488 | InterPro:Homeobox-like_sf | InterPro:Homeobox_dom | InterPro:IPR001356 | PANTHER:PTHR24326 | PANTHER:PTHR24326:SF280 |
| PFAM:PF00046 | PFscan:PS50071 | SEG:seg | SMART:SM00389 | SUPFAM:SSF46689 | MapMan:15.5.3.6 |
Description
No Description!
Coordinates
chr4D:+:306795400..306797969
Molecular Weight (calculated)
31484.9 Da
IEP (calculated)
8.055
GRAVY (calculated)
-0.170
Length
306 amino acids
Sequence
(BLAST)
(BLAST)
001: MEGGSNSPDG QSSGGSPEER RSSGGRGAGE PVRSRWTPKP EQILILESIF NSGMVNPPKD ETVRIRKLLE RFGAVGDANV FYWFQNRRSR SRRRQRQMQA
101: AAAAAAASSA AAANSLPAAS ATIGLPSGTC SVHPMAIGGG ASQYEQQATS SSSSGSTGGS SLGLFAAHGA GVSGAGVGYL QASCGTSSPL ASGLMPDVDS
201: GGSDDLFAIS RQMGFVGSPA GSSSAAPNTA VQQQYYSCQL PAATITVFIN GVPMEVPRGP IDLRAMFGQD VVLLHSTGTL LPVNDYGILI QSLQMGESYF
301: LVSRQA
101: AAAAAAASSA AAANSLPAAS ATIGLPSGTC SVHPMAIGGG ASQYEQQATS SSSSGSTGGS SLGLFAAHGA GVSGAGVGYL QASCGTSSPL ASGLMPDVDS
201: GGSDDLFAIS RQMGFVGSPA GSSSAAPNTA VQQQYYSCQL PAATITVFIN GVPMEVPRGP IDLRAMFGQD VVLLHSTGTL LPVNDYGILI QSLQMGESYF
301: LVSRQA
001: MDQEQTPHSP TRHSRSPPSS ASGSTSAEPV RSRWSPKPEQ ILILESIFHS GMVNPPKEET VRIRKMLEKF GAVGDANVFY WFQNRRSRSR RRQRQLQAAA
101: AAADATTNTC DQTMMVSNSL PHHSGSDLGF GGCSTSSNYL FASSSSSYGG GCDNQSNSGM ENLLTMSGQM SYHEATHHHY QNHSSNVTSI LCPSDQNSNF
201: QYQQGAITVF INGVPTEVTR GGIDMKATFG EDLVLVHSSG VPLPTDEFGF LMHSLQHGEA YFLVPRQT
101: AAADATTNTC DQTMMVSNSL PHHSGSDLGF GGCSTSSNYL FASSSSSYGG GCDNQSNSGM ENLLTMSGQM SYHEATHHHY QNHSSNVTSI LCPSDQNSNF
201: QYQQGAITVF INGVPTEVTR GGIDMKATFG EDLVLVHSSG VPLPTDEFGF LMHSLQHGEA YFLVPRQT
Arabidopsis Description
WOX11WUSCHEL related homeobox 11 [Source:UniProtKB/TrEMBL;Acc:A0A1I9LND8]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.