Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4A01G130200.1 | Wheat | nucleus | 95.15 | 95.77 |
| TraesCS4D01G176400.1 | Wheat | nucleus | 93.85 | 94.77 |
| KXG39473 | Sorghum | nucleus | 82.85 | 81.53 |
| Zm00001d047559_P001 | Maize | nucleus | 79.29 | 77.78 |
| Zm00001d028986_P001 | Maize | nucleus | 80.26 | 76.78 |
| Os03t0325600-01 | Rice | nucleus | 82.2 | 71.35 |
| TraesCS2B01G117900.1 | Wheat | nucleus | 55.66 | 65.9 |
| HORVU4Hr1G051530.5 | Barley | nucleus | 73.14 | 65.51 |
| GSMUA_Achr10P... | Banana | nucleus | 51.46 | 65.16 |
| VIT_08s0056g01200.t01 | Wine grape | nucleus | 41.75 | 54.66 |
| Bra036446.1-P | Field mustard | nucleus | 43.37 | 50.57 |
| GSMUA_Achr10P... | Banana | nucleus | 43.37 | 50.38 |
| PGSC0003DMT400069529 | Potato | nucleus | 39.16 | 49.39 |
| KRG94925 | Soybean | nucleus | 44.66 | 49.29 |
| CDY38461 | Canola | nucleus | 42.07 | 47.45 |
| CDY29949 | Canola | nucleus | 44.34 | 47.4 |
| CDY21173 | Canola | nucleus | 44.34 | 47.4 |
| Solyc06g072890.1.1 | Tomato | nucleus | 40.45 | 47.35 |
| GSMUA_Achr6P15910_001 | Banana | nucleus | 48.54 | 47.32 |
| Bra002108.1-P | Field mustard | nucleus | 41.75 | 47.25 |
| CDY16883 | Canola | nucleus | 41.75 | 46.74 |
| AT5G17810.2 | Thale cress | nucleus | 40.45 | 46.64 |
| GSMUA_Achr5P27730_001 | Banana | nucleus | 46.93 | 46.47 |
| KRH64971 | Soybean | nucleus | 43.37 | 45.42 |
| TraesCS3B01G087800.1 | Wheat | nucleus | 37.86 | 44.83 |
| Bra023638.1-P | Field mustard | nucleus | 39.81 | 44.73 |
| CDY02686 | Canola | nucleus | 40.78 | 44.52 |
| CDY66087 | Canola | nucleus | 38.84 | 42.86 |
| AT3G03660.3 | Thale cress | nucleus, plastid | 44.34 | 42.02 |
| CDY72488 | Canola | nucleus, plastid | 32.69 | 40.89 |
| GSMUA_Achr9P05010_001 | Banana | nucleus, plastid | 47.9 | 40.77 |
| Bra031980.1-P | Field mustard | nucleus | 42.39 | 40.68 |
| CDY51756 | Canola | plastid | 42.72 | 40.49 |
| CDY50656 | Canola | nucleus | 42.72 | 38.94 |
| GSMUA_Achr8P01590_001 | Banana | nucleus | 46.6 | 34.29 |
| TraesCS3B01G399800.1 | Wheat | nucleus | 11.33 | 16.75 |
| TraesCS3B01G373800.1 | Wheat | nucleus | 13.92 | 16.48 |
| TraesCS2B01G542600.1 | Wheat | plastid | 12.62 | 16.46 |
| TraesCS5B01G156400.1 | Wheat | nucleus | 12.62 | 16.18 |
| TraesCS1B01G427400.1 | Wheat | nucleus, plastid | 25.24 | 16.08 |
| TraesCS1B01G069000.1 | Wheat | nucleus, plastid | 12.62 | 14.77 |
| TraesCS3B01G272200.1 | Wheat | nucleus, plastid | 22.98 | 13.79 |
| TraesCS3B01G391100.1 | Wheat | nucleus | 12.95 | 13.38 |
| TraesCS5B01G091000.1 | Wheat | nucleus | 13.27 | 12.77 |
| TraesCS3B01G391200.1 | Wheat | nucleus | 10.68 | 11.38 |
Protein Annotations
| EnsemblPlants:TraesCS4B01G174400.1 | EnsemblPlantsGene:TraesCS4B01G174400 | Gene3D:1.10.10.60 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0005488 | InterPro:Homeobox-like_sf | InterPro:Homeobox_dom | InterPro:IPR001356 | PANTHER:PTHR24326 | PANTHER:PTHR24326:SF280 |
| PFAM:PF00046 | PFscan:PS50071 | SEG:seg | SMART:SM00389 | SUPFAM:SSF46689 | MapMan:15.5.3.6 |
Description
No Description!
Coordinates
chr4B:+:382692000..382694505
Molecular Weight (calculated)
31808.3 Da
IEP (calculated)
8.464
GRAVY (calculated)
-0.183
Length
309 amino acids
Sequence
(BLAST)
(BLAST)
001: MEGGSNSPDR QSSGGSPDER RSGGRGAGEP VRSRWTPKPE QILILESIFN SGMVNPPKDE TVRIRKLLER FGAVGDANVF YWFQNRRSRS RRRQRQMQAA
101: AAAAAAAAAA ASSATANSLP AASATIGLPS GTGSVHPMAI GGCASQYEQQ ATSSSSSGST GGSSLGPFAA HGAGVPGAGV GYLQASCGTS SPLASGLMAD
201: VDTGGSDDLF AISRQMGFVG SPAGPSSSAP STAVQQQYYS CQLPAATITV FINGVPMEVP RGPIDLRAMF GQDVVLLHST GTLLPVNDYG ILIQSLQMGE
301: SYFLVSRQT
101: AAAAAAAAAA ASSATANSLP AASATIGLPS GTGSVHPMAI GGCASQYEQQ ATSSSSSGST GGSSLGPFAA HGAGVPGAGV GYLQASCGTS SPLASGLMAD
201: VDTGGSDDLF AISRQMGFVG SPAGPSSSAP STAVQQQYYS CQLPAATITV FINGVPMEVP RGPIDLRAMF GQDVVLLHST GTLLPVNDYG ILIQSLQMGE
301: SYFLVSRQT
001: MDQEQTPHSP TRHSRSPPSS ASGSTSAEPV RSRWSPKPEQ ILILESIFHS GMVNPPKEET VRIRKMLEKF GAVGDANVFY WFQNRRSRSR RRQRQLQAAA
101: AAADATTNTC DQTMMVSNSL PHHSGSDLGF GGCSTSSNYL FGGSSQVPSF FLGLSSSPSS CSSSSSTSSS ASSSSSYGGG CDNQSNSGME NLLTMSGQMS
201: YHEATHHHYQ NHSSNVTSIL CPSDQNSNFQ YQQGAITVFI NGVPTEVTRG GIDMKATFGE DLVLVHSSGV PLPTDEFGFL MHSLQHGEAY FLVPRQT
101: AAADATTNTC DQTMMVSNSL PHHSGSDLGF GGCSTSSNYL FGGSSQVPSF FLGLSSSPSS CSSSSSTSSS ASSSSSYGGG CDNQSNSGME NLLTMSGQMS
201: YHEATHHHYQ NHSSNVTSIL CPSDQNSNFQ YQQGAITVFI NGVPTEVTRG GIDMKATFGE DLVLVHSSGV PLPTDEFGFL MHSLQHGEAY FLVPRQT
Arabidopsis Description
WOX11WUSCHEL related homeobox 11 [Source:UniProtKB/TrEMBL;Acc:A0A1I9LND8]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.