Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 3
- mitochondrion 1
- nucleus 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5D01G097400.1 | Wheat | nucleus | 91.59 | 91.3 |
| TraesCS5A01G085000.1 | Wheat | nucleus | 89.1 | 89.94 |
| Os01t0840300-00 | Rice | cytosol, mitochondrion, nucleus | 18.07 | 89.23 |
| HORVU5Hr1G022120.1 | Barley | nucleus | 68.22 | 79.35 |
| TraesCS3B01G391100.1 | Wheat | nucleus | 47.98 | 51.51 |
| TraesCS3B01G391200.1 | Wheat | nucleus | 44.86 | 49.66 |
| Zm00001d042920_P001 | Maize | nucleus | 48.29 | 47.84 |
| OQU87830 | Sorghum | nucleus | 47.04 | 44.41 |
| Zm00001d012419_P001 | Maize | nucleus | 44.86 | 41.98 |
| TraesCS2B01G542600.1 | Wheat | plastid | 19.63 | 26.58 |
| TraesCS5B01G156400.1 | Wheat | nucleus | 19.63 | 26.14 |
| TraesCS3B01G399800.1 | Wheat | nucleus | 16.82 | 25.84 |
| TraesCS1B01G069000.1 | Wheat | nucleus, plastid | 18.07 | 21.97 |
| TraesCS3B01G373800.1 | Wheat | nucleus | 13.4 | 16.48 |
| TraesCS2B01G117900.1 | Wheat | nucleus | 10.9 | 13.41 |
| TraesCS4B01G174400.1 | Wheat | nucleus | 12.77 | 13.27 |
| TraesCS3B01G087800.1 | Wheat | nucleus | 10.28 | 12.64 |
| TraesCS3B01G272200.1 | Wheat | nucleus, plastid | 14.02 | 8.74 |
| TraesCS1B01G427400.1 | Wheat | nucleus, plastid | 13.08 | 8.66 |
Protein Annotations
| EnsemblPlants:TraesCS5B01G091000.1 | EnsemblPlantsGene:TraesCS5B01G091000 | Gene3D:1.10.10.60 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0005488 | InterPro:Homeobox-like_sf | InterPro:Homeobox_dom | InterPro:IPR001356 | PANTHER:PTHR24326 | PANTHER:PTHR24326:SF203 |
| PFAM:PF00046 | PFscan:PS50071 | SEG:seg | SMART:SM00389 | SUPFAM:SSF46689 | MapMan:15.5.3.6 |
Description
No Description!
Coordinates
chr5B:+:118451951..118454135
Molecular Weight (calculated)
34543.7 Da
IEP (calculated)
10.917
GRAVY (calculated)
-0.637
Length
321 amino acids
Sequence
(BLAST)
(BLAST)
001: MESAEHQQQA ATRSRSPSLP AAPPSPPLSP NSAAAAALAN ARWTPTKEQV GVLEGLYRQG LRTPTAEQIQ QVTARLQKHG PIEGKNVFYW FQNHKARQRQ
101: RQKQQAFDYF SKQFRRPQPL PVLHRPAAHP SLPPIPLQAP PPHMSSATPP DLPASPACNR QAMHRQQPSY VTAAAAVAAT QAAANASHYM QTQTQTPMLY
201: PGVEAVAHDK VQTQAPATMY HQAPAQNNAG TQQPRALQLP PAAGTHGPPA ARSRRPETLN LFPLHPTFAI PQKTRPAGIA GSATPTATVP SASGSGSFSW
301: EPESPRGDAS LPLYDFFGVG R
101: RQKQQAFDYF SKQFRRPQPL PVLHRPAAHP SLPPIPLQAP PPHMSSATPP DLPASPACNR QAMHRQQPSY VTAAAAVAAT QAAANASHYM QTQTQTPMLY
201: PGVEAVAHDK VQTQAPATMY HQAPAQNNAG TQQPRALQLP PAAGTHGPPA ARSRRPETLN LFPLHPTFAI PQKTRPAGIA GSATPTATVP SASGSGSFSW
301: EPESPRGDAS LPLYDFFGVG R
001: MENEVNAGTA SSSRWNPTKD QITLLENLYK EGIRTPSADQ IQQITGRLRA YGHIEGKNVF YWFQNHKARQ RQKQKQERMA YFNRLLHKTS RFFYPPPCSN
101: VGCVSPYYLQ QASDHHMNQH GSVYTNDLLH RNNVMIPSGG YEKRTVTQHQ KQLSDIRTTA ATRMPISPSS LRFDRFALRD NCYAGEDINV NSSGRKTLPL
201: FPLQPLNASN ADGMGSSSFA LGSDSPVDCS SDGAGREQPF IDFFSGGSTS TRFDSNGNGL
101: VGCVSPYYLQ QASDHHMNQH GSVYTNDLLH RNNVMIPSGG YEKRTVTQHQ KQLSDIRTTA ATRMPISPSS LRFDRFALRD NCYAGEDINV NSSGRKTLPL
201: FPLQPLNASN ADGMGSSSFA LGSDSPVDCS SDGAGREQPF IDFFSGGSTS TRFDSNGNGL
Arabidopsis Description
WOX2WUSCHEL-related homeobox 2 [Source:UniProtKB/Swiss-Prot;Acc:Q6X7K1]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.