Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3D01G073300.1 | Wheat | nucleus | 95.02 | 95.02 |
| TraesCS3A01G073500.1 | Wheat | nucleus | 92.72 | 93.08 |
| HORVU3Hr1G013290.3 | Barley | nucleus | 91.57 | 91.57 |
| HORVU3Hr1G013330.1 | Barley | nucleus | 66.67 | 89.69 |
| KXG24798 | Sorghum | nucleus | 67.05 | 63.41 |
| Os08t0242400-01 | Rice | nucleus | 63.98 | 58.8 |
| Zm00001d024410_P001 | Maize | nucleus | 64.75 | 57.48 |
| TraesCS2B01G117900.1 | Wheat | nucleus | 48.28 | 48.28 |
| GSMUA_Achr10P... | Banana | nucleus | 44.83 | 47.95 |
| VIT_08s0056g01200.t01 | Wine grape | nucleus | 40.61 | 44.92 |
| GSMUA_Achr10P... | Banana | nucleus | 43.68 | 42.86 |
| PGSC0003DMT400069529 | Potato | nucleus | 39.08 | 41.63 |
| Bra036446.1-P | Field mustard | nucleus | 40.23 | 39.62 |
| Solyc06g072890.1.1 | Tomato | nucleus | 39.85 | 39.39 |
| KRG94925 | Soybean | nucleus | 41.0 | 38.21 |
| GSMUA_Achr5P27730_001 | Banana | nucleus | 45.59 | 38.14 |
| TraesCS4B01G174400.1 | Wheat | nucleus | 44.83 | 37.86 |
| KRH64971 | Soybean | nucleus | 42.15 | 37.29 |
| CDY38461 | Canola | nucleus | 39.08 | 37.23 |
| CDY21173 | Canola | nucleus | 41.0 | 37.02 |
| CDY29949 | Canola | nucleus | 41.0 | 37.02 |
| AT5G17810.2 | Thale cress | nucleus | 37.93 | 36.94 |
| CDY16883 | Canola | nucleus | 38.7 | 36.59 |
| GSMUA_Achr6P15910_001 | Banana | nucleus | 44.44 | 36.59 |
| Bra002108.1-P | Field mustard | nucleus | 37.93 | 36.26 |
| Bra023638.1-P | Field mustard | nucleus | 37.93 | 36.0 |
| CDY66087 | Canola | nucleus | 37.55 | 35.0 |
| CDY02686 | Canola | nucleus | 37.55 | 34.63 |
| Bra031980.1-P | Field mustard | nucleus | 39.85 | 32.3 |
| AT3G03660.3 | Thale cress | nucleus, plastid | 40.23 | 32.21 |
| GSMUA_Achr9P05010_001 | Banana | nucleus, plastid | 44.44 | 31.96 |
| CDY51756 | Canola | plastid | 39.46 | 31.6 |
| CDY72488 | Canola | nucleus, plastid | 29.12 | 30.77 |
| CDY50656 | Canola | nucleus | 39.46 | 30.38 |
| GSMUA_Achr8P01590_001 | Banana | nucleus | 47.89 | 29.76 |
| TraesCS3B01G373800.1 | Wheat | nucleus | 16.09 | 16.09 |
| TraesCS5B01G156400.1 | Wheat | nucleus | 14.18 | 15.35 |
| TraesCS1B01G427400.1 | Wheat | nucleus, plastid | 28.35 | 15.26 |
| TraesCS3B01G399800.1 | Wheat | nucleus | 11.49 | 14.35 |
| TraesCS3B01G272200.1 | Wheat | nucleus, plastid | 27.97 | 14.17 |
| TraesCS2B01G542600.1 | Wheat | plastid | 12.64 | 13.92 |
| TraesCS1B01G069000.1 | Wheat | nucleus, plastid | 13.41 | 13.26 |
| TraesCS3B01G391100.1 | Wheat | nucleus | 13.79 | 12.04 |
| TraesCS5B01G091000.1 | Wheat | nucleus | 12.64 | 10.28 |
| TraesCS3B01G391200.1 | Wheat | nucleus | 11.11 | 10.0 |
Protein Annotations
| EnsemblPlants:TraesCS3B01G087800.1 | EnsemblPlantsGene:TraesCS3B01G087800 | Gene3D:1.10.10.60 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0005488 | InterPro:Homeobox-like_sf | InterPro:Homeobox_dom | InterPro:IPR001356 | PANTHER:PTHR24326 | PANTHER:PTHR24326:SF202 |
| PFAM:PF00046 | PFscan:PS50071 | SEG:seg | SMART:SM00389 | SUPFAM:SSF46689 | MapMan:15.5.3.6 |
Description
No Description!
Coordinates
chr3B:+:56055903..56057416
Molecular Weight (calculated)
28042.9 Da
IEP (calculated)
6.784
GRAVY (calculated)
-0.361
Length
261 amino acids
Sequence
(BLAST)
(BLAST)
001: MDQHNHGQAP AHRGGRSSEG GEPTTTRSRW APKPEQILIL ESIFNSGMVN PAKDETARIR LLLERFGAVR DANVFYWFQN RRSRSRRRAR QLQQSCGGTG
101: DADQLSSNAA AAGHGCHGIG TSPYNTMQYG QLCGGVSAAA AAVTGPPRFS VDDADSGDDL FAIPRQMGLM SRGGEDQYGY TATDASQLSY QATVPGTTMP
201: VFINGSVYEV PSTGVLDVAG TFGSDVILVH SSGEILPVNE RGVLMKSLQM GECYYLVFRS I
101: DADQLSSNAA AAGHGCHGIG TSPYNTMQYG QLCGGVSAAA AAVTGPPRFS VDDADSGDDL FAIPRQMGLM SRGGEDQYGY TATDASQLSY QATVPGTTMP
201: VFINGSVYEV PSTGVLDVAG TFGSDVILVH SSGEILPVNE RGVLMKSLQM GECYYLVFRS I
001: MNQEGASHSP SSTSTEPVRA RWSPKPEQIL ILESIFNSGT VNPPKDETVR IRKMLEKFGA VGDANVFYWF QNRRSRSRRR HRQLLAATTA AATSIGAEDH
101: QHMTAMSMHQ YPCSNNEIDL GFGSCSNLSA NYFLNGSSSS QIPSFFLGLS SSSGGCENNN GMENLFKMYG HESDHNHQQQ HHSSNAASVL NPSDQNSNSQ
201: YEQEGFMTVF INGVPMEVTK GAIDMKTMFG DDSVLLHSSG LPLPTDEFGF LMHSLQHGQT YFLVPRQT
101: QHMTAMSMHQ YPCSNNEIDL GFGSCSNLSA NYFLNGSSSS QIPSFFLGLS SSSGGCENNN GMENLFKMYG HESDHNHQQQ HHSSNAASVL NPSDQNSNSQ
201: YEQEGFMTVF INGVPMEVTK GAIDMKTMFG DDSVLLHSSG LPLPTDEFGF LMHSLQHGQT YFLVPRQT
Arabidopsis Description
WOX12WUSCHEL-related homeobox 12 [Source:UniProtKB/Swiss-Prot;Acc:Q8GY25]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.