Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3A01G341700.1 | Wheat | nucleus | 98.08 | 96.6 |
| TraesCS3D01G335500.1 | Wheat | nucleus | 92.34 | 91.64 |
| TraesCSU01G204800.1 | Wheat | nucleus | 52.87 | 88.46 |
| HORVU3Hr1G080660.5 | Barley | nucleus | 90.04 | 87.69 |
| Os01t0818400-01 | Rice | nucleus | 80.08 | 78.28 |
| EES01660 | Sorghum | nucleus | 73.95 | 69.42 |
| Zm00001d043076_P001 | Maize | nucleus | 72.03 | 68.86 |
| Zm00001d012516_P001 | Maize | nucleus | 69.73 | 64.54 |
| KRH60910 | Soybean | nucleus | 47.13 | 59.13 |
| VIT_04s0044g00150.t01 | Wine grape | nucleus | 53.26 | 58.16 |
| VIT_04s0044g00160.t01 | Wine grape | nucleus | 50.96 | 56.36 |
| KRH51590 | Soybean | nucleus | 46.74 | 55.71 |
| GSMUA_Achr4P25530_001 | Banana | nucleus | 44.83 | 55.45 |
| VIT_18s0122g01140.t01 | Wine grape | nucleus | 58.62 | 54.84 |
| CDY01358 | Canola | nucleus | 27.2 | 53.38 |
| Bra012245.1-P | Field mustard | nucleus | 27.2 | 53.38 |
| PGSC0003DMT400003980 | Potato | nucleus | 54.02 | 51.27 |
| Solyc02g082670.2.1 | Tomato | nucleus | 53.64 | 51.09 |
| KRH01611 | Soybean | nucleus | 49.04 | 48.12 |
| KRH36192 | Soybean | nucleus | 50.96 | 47.33 |
| KRH70496 | Soybean | nucleus | 47.51 | 47.33 |
| KRG90565 | Soybean | nucleus | 48.66 | 44.72 |
| AT1G20710.1 | Thale cress | nucleus | 31.42 | 41.62 |
| Bra025839.1-P | Field mustard | nucleus | 31.8 | 40.89 |
| CDY29511 | Canola | nucleus | 31.8 | 40.89 |
| CDX93197 | Canola | nucleus | 30.27 | 40.51 |
| CDY31870 | Canola | nucleus | 30.27 | 40.51 |
| CDY65899 | Canola | nucleus | 32.18 | 40.19 |
| AT1G20700.1 | Thale cress | nucleus | 31.42 | 38.86 |
| TraesCS2B01G542600.1 | Wheat | plastid | 14.94 | 16.46 |
| TraesCS3B01G087800.1 | Wheat | nucleus | 16.09 | 16.09 |
| TraesCS2B01G117900.1 | Wheat | nucleus | 15.71 | 15.71 |
| TraesCS3B01G399800.1 | Wheat | nucleus | 12.26 | 15.31 |
| TraesCS5B01G156400.1 | Wheat | nucleus | 13.03 | 14.11 |
| TraesCS1B01G069000.1 | Wheat | nucleus, plastid | 14.18 | 14.02 |
| TraesCS4B01G174400.1 | Wheat | nucleus | 16.48 | 13.92 |
| TraesCS5B01G091000.1 | Wheat | nucleus | 16.48 | 13.4 |
| TraesCS3B01G391100.1 | Wheat | nucleus | 14.94 | 13.04 |
| TraesCS3B01G391200.1 | Wheat | nucleus | 13.79 | 12.41 |
| TraesCS1B01G427400.1 | Wheat | nucleus, plastid | 14.94 | 8.04 |
| TraesCS3B01G272200.1 | Wheat | nucleus, plastid | 15.33 | 7.77 |
Protein Annotations
| EnsemblPlants:TraesCS3B01G373800.1 | EnsemblPlantsGene:TraesCS3B01G373800 | Gene3D:1.10.10.60 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0005488 | InterPro:Homeobox-like_sf | InterPro:Homeobox_dom | InterPro:IPR001356 | PANTHER:PTHR24326 | PANTHER:PTHR24326:SF340 |
| PFAM:PF00046 | PFscan:PS50071 | SEG:seg | SMART:SM00389 | SUPFAM:SSF46689 | TIGR:cd00086 |
| MapMan:15.5.3.6 | : | : | : | : | : |
Description
No Description!
Coordinates
chr3B:+:586695125..586698000
Molecular Weight (calculated)
29205.0 Da
IEP (calculated)
6.104
GRAVY (calculated)
-0.874
Length
261 amino acids
Sequence
(BLAST)
(BLAST)
001: MEWDKASAAA AAGEPAEERG EALGYVKVMT DEQMEVLRKQ ISIYATICEQ LVEMHRALTA HQDSIAGMRL GNLYCDPLMV HGGHKITARQ RWTPTQMQLQ
101: ILESIFDQGN GTPSKQKIKD ITAELSQHGQ ISETNVYNWF QNRRARSKRK QAASSLPSNT ESEAEGDEDS PTDKKPRSDG SQQQSMAARA HNPERISEMH
201: RHFDAAEREQ VRGPMYGSGN DSGARPSGGL GQMSFYENVM SNPRIDQFFQ YRTGESFDMS G
101: ILESIFDQGN GTPSKQKIKD ITAELSQHGQ ISETNVYNWF QNRRARSKRK QAASSLPSNT ESEAEGDEDS PTDKKPRSDG SQQQSMAARA HNPERISEMH
201: RHFDAAEREQ VRGPMYGSGN DSGARPSGGL GQMSFYENVM SNPRIDQFFQ YRTGESFDMS G
001: MMEWDNQLQP NNHHSSNLQG IDVNGGSGAG GGMYVKVMTD EQYETLRKQI AIYGTICERL VEMHKTLTAQ QDLAGGRMGG LYADPMMSSL GHKMTARQRW
101: TPTPVQLQIL ERIFDQGTGT PSKQKIKDIT EELSQHGQIA EQNVYNWFQN RRARSKRKQH GGGSSGNNNG ESEVETEVEA LNEKRVVRPE SLLGLPDGNS
201: NNNGLGTTTA TTTAPRPEDL CFQSPEISSD LHLLDVLSNP RDEHLVGKMG LAESYNLYDH VEDYGMSG
101: TPTPVQLQIL ERIFDQGTGT PSKQKIKDIT EELSQHGQIA EQNVYNWFQN RRARSKRKQH GGGSSGNNNG ESEVETEVEA LNEKRVVRPE SLLGLPDGNS
201: NNNGLGTTTA TTTAPRPEDL CFQSPEISSD LHLLDVLSNP RDEHLVGKMG LAESYNLYDH VEDYGMSG
Arabidopsis Description
WOX13WOX13 [Source:UniProtKB/TrEMBL;Acc:A0A178UZQ1]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.