Factsheet for TraesCS3B01G391100.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

plastid 3
nucleus 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus, plastid
ChloroP:	plastid
MultiLoc:	nucleus
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3D01G352500.1	Wheat	nucleus	91.3	91.61
TraesCS3A01G358100.1	Wheat	nucleus	91.97	91.36
HORVU3Hr1G086450.1	Barley	nucleus, plastid	79.93	87.23
TraesCS3D01G352600.1	Wheat	nucleus	78.93	82.81
Os01t0840300-00	Rice	cytosol, mitochondrion, nucleus	17.39	80.0
TraesCS3B01G391200.1	Wheat	nucleus	69.57	71.72
TraesCS5B01G091000.1	Wheat	nucleus	51.51	47.98
Zm00001d042920_P001	Maize	nucleus	38.46	35.49
OQU87830	Sorghum	nucleus	38.46	33.82
Zm00001d012419_P001	Maize	nucleus	36.45	31.78
TraesCS5B01G156400.1	Wheat	nucleus	20.4	25.31
TraesCS2B01G542600.1	Wheat	plastid	19.06	24.05
TraesCS1B01G069000.1	Wheat	nucleus, plastid	18.06	20.45
TraesCS3B01G399800.1	Wheat	nucleus	12.37	17.7
TraesCS3B01G373800.1	Wheat	nucleus	13.04	14.94
TraesCS2B01G117900.1	Wheat	nucleus	12.37	14.18
TraesCS3B01G087800.1	Wheat	nucleus	12.04	13.79
TraesCS4B01G174400.1	Wheat	nucleus	13.38	12.95
TraesCS3B01G272200.1	Wheat	nucleus, plastid	14.72	8.54
TraesCS1B01G427400.1	Wheat	nucleus, plastid	13.38	8.25

Protein Annotations

EnsemblPlants:TraesCS3B01G391100.1	EnsemblPlantsGene:TraesCS3B01G391100	Gene3D:1.10.10.60	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0005488	InterPro:Homeobox-like_sf	InterPro:Homeobox_dom	InterPro:IPR001356	PANTHER:PTHR24326	PANTHER:PTHR24326:SF203
PFAM:PF00046	PFscan:PS50071	SEG:seg	SMART:SM00389	SUPFAM:SSF46689	MapMan:15.5.3.6

Description

No Description!

Coordinates

chr3B:-:616425121..616426978

Molecular Weight (calculated)

33042.3 Da

IEP (calculated)

9.433

GRAVY (calculated)

-0.792

Length

299 amino acids

Sequence
(BLAST)

001: MKSVEHHDEA ATGLSLSPPP TSAPLSPPIS SNSAAVAALA NARWVPTREQ IAVLEGLYRQ GMRTPTAEEV HQVTARLQEH GPIEGKNVFY WFQNRLRQKQ
101: KQQQRSDYFA RQLRRPQPLP TLRRTPGHSF SPVQLQAPPA PNTPACNREG MYMQQPCYMT GPAAQASANA SYYSQMQPSL TNPNVGTMAH GNIQAQAQAT
201: MYFQTAASNN SNTQQPHAVQ FPSTDGSYGA PDAYSRRPVL LNLFPQYPTF ANREKTRHTE SAGSPRPSTS RSFSWESESS EIPSGDGSRS FYDFFGEGH

Best Arabidopsis Sequence Match ( AT5G59340.1 )
(BLAST)

001: MENEVNAGTA SSSRWNPTKD QITLLENLYK EGIRTPSADQ IQQITGRLRA YGHIEGKNVF YWFQNHKARQ RQKQKQERMA YFNRLLHKTS RFFYPPPCSN
101: VGCVSPYYLQ QASDHHMNQH GSVYTNDLLH RNNVMIPSGG YEKRTVTQHQ KQLSDIRTTA ATRMPISPSS LRFDRFALRD NCYAGEDINV NSSGRKTLPL
201: FPLQPLNASN ADGMGSSSFA LGSDSPVDCS SDGAGREQPF IDFFSGGSTS TRFDSNGNGL

Arabidopsis Description

WOX2WUSCHEL-related homeobox 2 [Source:UniProtKB/Swiss-Prot;Acc:Q6X7K1]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.