Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3B01G373800.1 | Wheat | nucleus | 78.28 | 80.08 |
| TraesCS3A01G341700.1 | Wheat | nucleus | 78.28 | 78.87 |
| TraesCSU01G204800.1 | Wheat | nucleus | 45.69 | 78.21 |
| HORVU3Hr1G080660.5 | Barley | nucleus | 76.78 | 76.49 |
| TraesCS3D01G335500.1 | Wheat | nucleus | 75.28 | 76.43 |
| EES01660 | Sorghum | nucleus | 79.03 | 75.9 |
| Zm00001d043076_P001 | Maize | nucleus | 77.53 | 75.82 |
| Zm00001d012516_P001 | Maize | nucleus | 73.78 | 69.86 |
| HORVU3Hr1G080690.1 | Barley | nucleus | 32.21 | 66.15 |
| KRH60910 | Soybean | nucleus | 47.94 | 61.54 |
| VIT_18s0122g01140.t01 | Wine grape | nucleus | 63.3 | 60.57 |
| VIT_04s0044g00150.t01 | Wine grape | nucleus | 53.56 | 59.83 |
| GSMUA_Achr4P25530_001 | Banana | nucleus | 47.19 | 59.72 |
| VIT_04s0044g00160.t01 | Wine grape | nucleus | 51.69 | 58.47 |
| KRH51590 | Soybean | nucleus | 47.19 | 57.53 |
| PGSC0003DMT400003980 | Potato | nucleus | 56.18 | 54.55 |
| Solyc02g082670.2.1 | Tomato | nucleus | 55.81 | 54.38 |
| CDY01358 | Canola | nucleus | 26.59 | 53.38 |
| Bra012245.1-P | Field mustard | nucleus | 26.59 | 53.38 |
| KRH01611 | Soybean | nucleus | 49.06 | 49.25 |
| KRH36192 | Soybean | nucleus | 51.69 | 49.11 |
| KRH70496 | Soybean | nucleus | 47.19 | 48.09 |
| Os01t0840300-00 | Rice | cytosol, mitochondrion, nucleus | 11.61 | 47.69 |
| KRG90565 | Soybean | nucleus | 49.06 | 46.13 |
| AT1G20710.1 | Thale cress | nucleus | 30.71 | 41.62 |
| Os05t0564500-00 | Rice | mitochondrion, nucleus, peroxisome | 10.11 | 41.54 |
| Os07t0533201-00 | Rice | mitochondrion, nucleus, peroxisome | 10.11 | 41.54 |
| CDX93197 | Canola | nucleus | 29.96 | 41.03 |
| CDY31870 | Canola | nucleus | 29.96 | 41.03 |
| Bra025839.1-P | Field mustard | nucleus | 30.71 | 40.39 |
| CDY29511 | Canola | nucleus | 30.71 | 40.39 |
| CDY65899 | Canola | nucleus | 31.09 | 39.71 |
| AT1G20700.1 | Thale cress | nucleus | 30.71 | 38.86 |
| Os07t0684900-01 | Rice | nucleus | 17.6 | 17.94 |
| Os01t0854500-01 | Rice | nucleus | 11.98 | 16.0 |
| Os12t0101600-01 | Rice | nucleus | 13.86 | 15.81 |
| Os11t0102100-01 | Rice | nucleus | 13.86 | 15.81 |
| Os08t0242400-01 | Rice | nucleus | 16.48 | 15.49 |
| Os04t0649400-01 | Rice | plastid | 13.11 | 14.83 |
| Os05t0118700-00 | Rice | nucleus | 14.23 | 13.29 |
| Os04t0663600-01 | Rice | nucleus | 13.86 | 12.8 |
| Os03t0325600-01 | Rice | nucleus | 14.98 | 11.24 |
| Os01t0667400-02 | Rice | plastid | 16.48 | 8.26 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.3.6 | EntrezGene:4327441 | EMBL:AK068585 | EMBL:AM234755 | ProteinID:BAD73349.1 |
| ProteinID:BAF06545.1 | ProteinID:BAS74946.1 | ProteinID:EEE55584.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 |
| GO:GO:0006351 | GO:GO:0006355 | GO:GO:0007275 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | InterPro:Homeobox-like_sf | InterPro:Homeobox_dom | InterPro:IPR001356 | EnsemblPlantsGene:Os01g0818400 | EnsemblPlants:Os01t0818400-01 |
| PFAM:PF00046 | PFscan:PS50071 | PANTHER:PTHR24326 | PANTHER:PTHR24326:SF340 | UniProt:Q5QMM3 | SMART:SM00389 |
| SUPFAM:SSF46689 | UniParc:UPI000048DF35 | RefSeq:XP_015626455.1 | SEG:seg | : | : |
Description
WUSCHEL-LIKE HOMEOBOX 8Homeodomain-like containing protein. (Os01t0818400-01);Homeodomain-like containing protein. (Os01t0818400-02);Homeodomain-like containing protein. (Os01t0818400-03)
Coordinates
chr1:+:34862487..34865889
Molecular Weight (calculated)
30240.4 Da
IEP (calculated)
6.352
GRAVY (calculated)
-0.893
Length
267 amino acids
Sequence
(BLAST)
(BLAST)
001: MEWDKAKASS GEAVDDRGGG EGGLGYVKVM TDEQMEVLRK QISIYATICE QLVEMHRALT AQQDSIAGMR LGNLYCDPLM VPGGHKITAR QRWTPTPMQL
101: QILENIFDQG NGTPSKQKIK DITAELSQHG QISETNVYNW FQNRRARSKR KQAALPNNNA ESEAEADEES PTDKKPKSDR PLHQNIAMRD HNSERISEMH
201: HFDTEHEQIR RMMYASNDSS SRSSGSLGQM SFYDNVMSNP RIDHFLGKVE SPGSFPHMRS GESFDMY
101: QILENIFDQG NGTPSKQKIK DITAELSQHG QISETNVYNW FQNRRARSKR KQAALPNNNA ESEAEADEES PTDKKPKSDR PLHQNIAMRD HNSERISEMH
201: HFDTEHEQIR RMMYASNDSS SRSSGSLGQM SFYDNVMSNP RIDHFLGKVE SPGSFPHMRS GESFDMY
001: MMEWDNQLQP NNHHSSNLQG IDVNGGSGAG GGMYVKVMTD EQYETLRKQI AIYGTICERL VEMHKTLTAQ QDLAGGRMGG LYADPMMSSL GHKMTARQRW
101: TPTPVQLQIL ERIFDQGTGT PSKQKIKDIT EELSQHGQIA EQNVYNWFQN RRARSKRKQH GGGSSGNNNG ESEVETEVEA LNEKRVVRPE SLLGLPDGNS
201: NNNGLGTTTA TTTAPRPEDL CFQSPEISSD LHLLDVLSNP RDEHLVGKMG LAESYNLYDH VEDYGMSG
101: TPTPVQLQIL ERIFDQGTGT PSKQKIKDIT EELSQHGQIA EQNVYNWFQN RRARSKRKQH GGGSSGNNNG ESEVETEVEA LNEKRVVRPE SLLGLPDGNS
201: NNNGLGTTTA TTTAPRPEDL CFQSPEISSD LHLLDVLSNP RDEHLVGKMG LAESYNLYDH VEDYGMSG
Arabidopsis Description
WOX13WOX13 [Source:UniProtKB/TrEMBL;Acc:A0A178UZQ1]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.