Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH36192 | Soybean | nucleus | 91.2 | 92.17 |
| KRH01611 | Soybean | nucleus | 65.49 | 69.92 |
| KRH70496 | Soybean | nucleus | 63.03 | 68.32 |
| VIT_04s0044g00150.t01 | Wine grape | nucleus | 52.82 | 62.76 |
| VIT_04s0044g00160.t01 | Wine grape | nucleus | 51.06 | 61.44 |
| KRH60910 | Soybean | nucleus | 43.66 | 59.62 |
| GSMUA_Achr4P29470_001 | Banana | nucleus | 34.15 | 58.79 |
| Solyc02g082670.2.1 | Tomato | nucleus | 56.34 | 58.39 |
| PGSC0003DMT400003980 | Potato | nucleus | 55.99 | 57.82 |
| KRH51590 | Soybean | nucleus | 44.37 | 57.53 |
| GSMUA_Achr1P17980_001 | Banana | nucleus | 42.96 | 51.48 |
| TraesCSU01G204800.1 | Wheat | nucleus | 27.82 | 50.64 |
| Os01t0818400-01 | Rice | nucleus | 46.13 | 49.06 |
| TraesCS3B01G373800.1 | Wheat | nucleus | 44.72 | 48.66 |
| GSMUA_Achr7P04050_001 | Banana | nucleus | 39.79 | 48.29 |
| TraesCS3A01G341700.1 | Wheat | nucleus | 44.72 | 47.92 |
| TraesCS3D01G335500.1 | Wheat | nucleus | 44.37 | 47.91 |
| GSMUA_Achr5P11080_001 | Banana | nucleus | 36.97 | 47.73 |
| Zm00001d043076_P001 | Maize | nucleus | 44.37 | 46.15 |
| EES01660 | Sorghum | nucleus | 45.07 | 46.04 |
| GSMUA_AchrUn_... | Banana | nucleus | 44.01 | 44.01 |
| Zm00001d012516_P001 | Maize | nucleus | 43.66 | 43.97 |
| GSMUA_Achr3P14840_001 | Banana | nucleus | 41.55 | 41.7 |
| KRG97769 | Soybean | nucleus | 12.32 | 20.11 |
| KRH31116 | Soybean | nucleus | 12.32 | 19.44 |
| KRH73152 | Soybean | nucleus | 11.97 | 19.21 |
| KRG94925 | Soybean | nucleus | 16.55 | 16.79 |
| KRG99904 | Soybean | nucleus | 11.97 | 16.19 |
| KRH61328 | Soybean | nucleus | 12.68 | 16.07 |
| KRH64971 | Soybean | nucleus | 16.2 | 15.59 |
| KRH23053 | Soybean | nucleus | 11.62 | 15.57 |
| KRH10279 | Soybean | nucleus | 11.97 | 15.53 |
| KRH41831 | Soybean | nucleus | 12.68 | 15.13 |
| KRH52024 | Soybean | nucleus | 11.97 | 14.78 |
| KRH49082 | Soybean | nucleus | 10.92 | 14.76 |
| KRH29810 | Soybean | nucleus | 13.03 | 14.18 |
| KRH28790 | Soybean | nucleus | 14.08 | 13.84 |
| KRH15387 | Soybean | nucleus | 10.92 | 13.42 |
| KRH50388 | Soybean | nucleus | 15.14 | 12.91 |
| KRH48612 | Soybean | nucleus | 16.2 | 12.89 |
| KRH76665 | Soybean | nucleus | 13.38 | 12.84 |
| KRH39103 | Soybean | nucleus | 14.44 | 12.77 |
| KRH05655 | Soybean | nucleus | 10.92 | 12.7 |
| KRH24809 | Soybean | nucleus | 14.44 | 12.54 |
| KRH60534 | Soybean | nucleus | 15.85 | 12.53 |
| KRG89341 | Soybean | nucleus | 14.79 | 12.46 |
| KRH30862 | Soybean | nucleus | 17.25 | 12.25 |
| KRH32713 | Soybean | nucleus | 17.25 | 12.16 |
| KRH50138 | Soybean | nucleus | 15.49 | 11.34 |
| KRH20358 | Soybean | nucleus | 14.08 | 10.28 |
Protein Annotations
| Gene3D:1.10.10.60 | EntrezGene:100817342 | MapMan:15.5.3.6 | EMBL:ACUP02012625 | EnsemblPlantsGene:GLYMA_20G099400 | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | InterPro:Homeobox-like_sf | InterPro:Homeobox_dom | InterPro:IPR001356 | UniProt:K7N2N1 | EnsemblPlants:KRG90565 |
| ProteinID:KRG90565 | ProteinID:KRG90565.1 | PFAM:PF00046 | PFscan:PS50071 | PANTHER:PTHR24326 | PANTHER:PTHR24326:SF340 |
| SMART:SM00389 | SUPFAM:SSF46689 | UniParc:UPI000233DACA | SEG:seg | : | : |
Description
hypothetical protein
Coordinates
chr20:-:34256302..34258793
Molecular Weight (calculated)
32169.7 Da
IEP (calculated)
6.942
GRAVY (calculated)
-0.751
Length
284 amino acids
Sequence
(BLAST)
(BLAST)
001: MVNVVELQKQ LQRWQQSGNV NVNVNVDANG ELMYVKVMTD EQLETLRKQI AVYGTICEQL IEMHRTLSAQ QDLAGVRLGN IYCDQLMTSG GHKITSRQRW
101: TPTPVQLQIL ERIFDQGNGT PSKEKIKEIT AELGQHGQIS ETNVYNWFQN RRARSKRRLQ NVAPSNTESE VDTEVDSKNK KTKAEEEFQS QHNITTSGGA
201: EKLCFQNPQV YSDHLHYLNP DSNKPYSMFQ SDCNLKSTRN SSHVSVFNEM LSNSRSEYVG GKMEVGGSVS YNLFHQTGDC NLAG
101: TPTPVQLQIL ERIFDQGNGT PSKEKIKEIT AELGQHGQIS ETNVYNWFQN RRARSKRRLQ NVAPSNTESE VDTEVDSKNK KTKAEEEFQS QHNITTSGGA
201: EKLCFQNPQV YSDHLHYLNP DSNKPYSMFQ SDCNLKSTRN SSHVSVFNEM LSNSRSEYVG GKMEVGGSVS YNLFHQTGDC NLAG
001: MMEWDNQLQP NNHHSSNLQG IDVNGGSGAG GGMYVKVMTD EQYETLRKQI AIYGTICERL VEMHKTLTAQ QDLAGGRMGG LYADPMMSSL GHKMTARQRW
101: TPTPVQLQIL ERIFDQGTGT PSKQKIKDIT EELSQHGQIA EQNVYNWFQN RRARSKRKQH GGGSSGNNNG ESEVETEVEA LNEKRVVRPE SLLGLPDGNS
201: NNNGLGTTTA TTTAPRPEDL CFQSPEISSD LHLLDVLSNP RDEHLVGKMG LAESYNLYDH VEDYGMSG
101: TPTPVQLQIL ERIFDQGTGT PSKQKIKDIT EELSQHGQIA EQNVYNWFQN RRARSKRKQH GGGSSGNNNG ESEVETEVEA LNEKRVVRPE SLLGLPDGNS
201: NNNGLGTTTA TTTAPRPEDL CFQSPEISSD LHLLDVLSNP RDEHLVGKMG LAESYNLYDH VEDYGMSG
Arabidopsis Description
WOX13WOX13 [Source:UniProtKB/TrEMBL;Acc:A0A178UZQ1]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.